Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27502 | 82729;82730;82731 | chr2:178563628;178563627;178563626 | chr2:179428355;179428354;179428353 |
N2AB | 25861 | 77806;77807;77808 | chr2:178563628;178563627;178563626 | chr2:179428355;179428354;179428353 |
N2A | 24934 | 75025;75026;75027 | chr2:178563628;178563627;178563626 | chr2:179428355;179428354;179428353 |
N2B | 18437 | 55534;55535;55536 | chr2:178563628;178563627;178563626 | chr2:179428355;179428354;179428353 |
Novex-1 | 18562 | 55909;55910;55911 | chr2:178563628;178563627;178563626 | chr2:179428355;179428354;179428353 |
Novex-2 | 18629 | 56110;56111;56112 | chr2:178563628;178563627;178563626 | chr2:179428355;179428354;179428353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.805 | N | 0.581 | 0.355 | 0.304760801415 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1066 | likely_benign | 0.1071 | benign | -0.457 | Destabilizing | 0.805 | D | 0.581 | neutral | N | 0.478480406 | None | None | I |
E/C | 0.588 | likely_pathogenic | 0.6034 | pathogenic | -0.043 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | I |
E/D | 0.1378 | likely_benign | 0.1379 | benign | -0.503 | Destabilizing | 0.025 | N | 0.216 | neutral | N | 0.416237081 | None | None | I |
E/F | 0.5651 | likely_pathogenic | 0.5902 | pathogenic | -0.366 | Destabilizing | 0.987 | D | 0.749 | deleterious | None | None | None | None | I |
E/G | 0.1346 | likely_benign | 0.1322 | benign | -0.686 | Destabilizing | 0.892 | D | 0.577 | neutral | N | 0.47628825 | None | None | I |
E/H | 0.2669 | likely_benign | 0.2979 | benign | -0.343 | Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | I |
E/I | 0.2046 | likely_benign | 0.2005 | benign | 0.119 | Stabilizing | 0.975 | D | 0.748 | deleterious | None | None | None | None | I |
E/K | 0.0893 | likely_benign | 0.0975 | benign | 0.095 | Stabilizing | 0.892 | D | 0.575 | neutral | N | 0.443559756 | None | None | I |
E/L | 0.2078 | likely_benign | 0.2198 | benign | 0.119 | Stabilizing | 0.95 | D | 0.637 | neutral | None | None | None | None | I |
E/M | 0.2846 | likely_benign | 0.2991 | benign | 0.335 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/N | 0.175 | likely_benign | 0.187 | benign | -0.138 | Destabilizing | 0.975 | D | 0.591 | neutral | None | None | None | None | I |
E/P | 0.6995 | likely_pathogenic | 0.6999 | pathogenic | -0.052 | Destabilizing | 0.987 | D | 0.673 | neutral | None | None | None | None | I |
E/Q | 0.0987 | likely_benign | 0.1071 | benign | -0.113 | Destabilizing | 0.983 | D | 0.596 | neutral | N | 0.397942109 | None | None | I |
E/R | 0.1387 | likely_benign | 0.1566 | benign | 0.28 | Stabilizing | 0.975 | D | 0.61 | neutral | None | None | None | None | I |
E/S | 0.1218 | likely_benign | 0.1317 | benign | -0.346 | Destabilizing | 0.845 | D | 0.548 | neutral | None | None | None | None | I |
E/T | 0.1081 | likely_benign | 0.1169 | benign | -0.169 | Destabilizing | 0.073 | N | 0.315 | neutral | None | None | None | None | I |
E/V | 0.1333 | likely_benign | 0.1282 | benign | -0.052 | Destabilizing | 0.935 | D | 0.574 | neutral | N | 0.453179316 | None | None | I |
E/W | 0.7438 | likely_pathogenic | 0.7837 | pathogenic | -0.229 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
E/Y | 0.442 | ambiguous | 0.4616 | ambiguous | -0.132 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.