Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27515 | 82768;82769;82770 | chr2:178563589;178563588;178563587 | chr2:179428316;179428315;179428314 |
N2AB | 25874 | 77845;77846;77847 | chr2:178563589;178563588;178563587 | chr2:179428316;179428315;179428314 |
N2A | 24947 | 75064;75065;75066 | chr2:178563589;178563588;178563587 | chr2:179428316;179428315;179428314 |
N2B | 18450 | 55573;55574;55575 | chr2:178563589;178563588;178563587 | chr2:179428316;179428315;179428314 |
Novex-1 | 18575 | 55948;55949;55950 | chr2:178563589;178563588;178563587 | chr2:179428316;179428315;179428314 |
Novex-2 | 18642 | 56149;56150;56151 | chr2:178563589;178563588;178563587 | chr2:179428316;179428315;179428314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs757660615 | -0.094 | 1.0 | N | 0.657 | 0.426 | 0.396044805602 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 1.78E-05 | 0 |
R/T | rs757660615 | -0.094 | 1.0 | N | 0.657 | 0.426 | 0.396044805602 | gnomAD-4.0.0 | 7.95651E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77423E-05 | None | 0 | 0 | 1.14337E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8474 | likely_pathogenic | 0.8222 | pathogenic | 0.063 | Stabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | I |
R/C | 0.3609 | ambiguous | 0.3415 | ambiguous | -0.305 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
R/D | 0.9624 | likely_pathogenic | 0.9555 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
R/E | 0.8759 | likely_pathogenic | 0.8519 | pathogenic | -0.301 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
R/F | 0.8012 | likely_pathogenic | 0.7856 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
R/G | 0.683 | likely_pathogenic | 0.6592 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.506992372 | None | None | I |
R/H | 0.2149 | likely_benign | 0.2091 | benign | -0.564 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
R/I | 0.6734 | likely_pathogenic | 0.6422 | pathogenic | 0.339 | Stabilizing | 1.0 | D | 0.757 | deleterious | N | 0.48233347 | None | None | I |
R/K | 0.2728 | likely_benign | 0.2661 | benign | -0.195 | Destabilizing | 0.997 | D | 0.635 | neutral | N | 0.5091286 | None | None | I |
R/L | 0.5766 | likely_pathogenic | 0.55 | ambiguous | 0.339 | Stabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
R/M | 0.7313 | likely_pathogenic | 0.6987 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
R/N | 0.9117 | likely_pathogenic | 0.8927 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
R/P | 0.9293 | likely_pathogenic | 0.9256 | pathogenic | 0.264 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
R/Q | 0.2755 | likely_benign | 0.2634 | benign | -0.173 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
R/S | 0.8847 | likely_pathogenic | 0.8685 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.519497522 | None | None | I |
R/T | 0.7816 | likely_pathogenic | 0.7402 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.508744598 | None | None | I |
R/V | 0.7602 | likely_pathogenic | 0.73 | pathogenic | 0.264 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
R/W | 0.3357 | likely_benign | 0.337 | benign | -0.517 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
R/Y | 0.6283 | likely_pathogenic | 0.6185 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.