Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2753 | 8482;8483;8484 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
N2AB | 2753 | 8482;8483;8484 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
N2A | 2753 | 8482;8483;8484 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
N2B | 2707 | 8344;8345;8346 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
Novex-1 | 2707 | 8344;8345;8346 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
Novex-2 | 2707 | 8344;8345;8346 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
Novex-3 | 2753 | 8482;8483;8484 | chr2:178770535;178770534;178770533 | chr2:179635262;179635261;179635260 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2091310789 | None | 1.0 | D | 0.798 | 0.585 | 0.701639087021 | gnomAD-4.0.0 | 1.5905E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85652E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8245 | likely_pathogenic | 0.8852 | pathogenic | -3.149 | Highly Destabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
Y/C | 0.3481 | ambiguous | 0.4261 | ambiguous | -2.207 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.570513175 | None | None | N |
Y/D | 0.7918 | likely_pathogenic | 0.87 | pathogenic | -3.26 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.652244966 | None | None | N |
Y/E | 0.8956 | likely_pathogenic | 0.9397 | pathogenic | -3.074 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Y/F | 0.1275 | likely_benign | 0.1358 | benign | -1.223 | Destabilizing | 0.434 | N | 0.315 | neutral | N | 0.51082682 | None | None | N |
Y/G | 0.8257 | likely_pathogenic | 0.8847 | pathogenic | -3.578 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
Y/H | 0.3652 | ambiguous | 0.4471 | ambiguous | -2.153 | Highly Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.584521428 | None | None | N |
Y/I | 0.6526 | likely_pathogenic | 0.7308 | pathogenic | -1.746 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
Y/K | 0.9203 | likely_pathogenic | 0.9508 | pathogenic | -2.384 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Y/L | 0.6983 | likely_pathogenic | 0.7723 | pathogenic | -1.746 | Destabilizing | 0.994 | D | 0.489 | neutral | None | None | None | None | N |
Y/M | 0.7781 | likely_pathogenic | 0.8343 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Y/N | 0.4322 | ambiguous | 0.5369 | ambiguous | -3.116 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.587997354 | None | None | N |
Y/P | 0.9867 | likely_pathogenic | 0.9924 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/Q | 0.8361 | likely_pathogenic | 0.8979 | pathogenic | -2.88 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Y/R | 0.8381 | likely_pathogenic | 0.888 | pathogenic | -2.053 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Y/S | 0.6517 | likely_pathogenic | 0.7487 | pathogenic | -3.536 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | D | 0.650001637 | None | None | N |
Y/T | 0.7046 | likely_pathogenic | 0.7866 | pathogenic | -3.225 | Highly Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Y/V | 0.5516 | ambiguous | 0.6331 | pathogenic | -2.226 | Highly Destabilizing | 0.997 | D | 0.635 | neutral | None | None | None | None | N |
Y/W | 0.5926 | likely_pathogenic | 0.6271 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.