Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27530 | 82813;82814;82815 | chr2:178563544;178563543;178563542 | chr2:179428271;179428270;179428269 |
N2AB | 25889 | 77890;77891;77892 | chr2:178563544;178563543;178563542 | chr2:179428271;179428270;179428269 |
N2A | 24962 | 75109;75110;75111 | chr2:178563544;178563543;178563542 | chr2:179428271;179428270;179428269 |
N2B | 18465 | 55618;55619;55620 | chr2:178563544;178563543;178563542 | chr2:179428271;179428270;179428269 |
Novex-1 | 18590 | 55993;55994;55995 | chr2:178563544;178563543;178563542 | chr2:179428271;179428270;179428269 |
Novex-2 | 18657 | 56194;56195;56196 | chr2:178563544;178563543;178563542 | chr2:179428271;179428270;179428269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.544 | 0.324 | 0.344483371355 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/T | None | None | 1.0 | N | 0.745 | 0.343 | 0.399017061211 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8576 | likely_pathogenic | 0.8091 | pathogenic | -0.401 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
R/C | 0.4559 | ambiguous | 0.3803 | ambiguous | -0.48 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
R/D | 0.9659 | likely_pathogenic | 0.9498 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
R/E | 0.8431 | likely_pathogenic | 0.7979 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
R/F | 0.9012 | likely_pathogenic | 0.8668 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
R/G | 0.815 | likely_pathogenic | 0.7551 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.492853628 | None | None | N |
R/H | 0.2557 | likely_benign | 0.2115 | benign | -1.0 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
R/I | 0.7308 | likely_pathogenic | 0.6691 | pathogenic | 0.167 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
R/K | 0.1841 | likely_benign | 0.1536 | benign | -0.408 | Destabilizing | 0.997 | D | 0.544 | neutral | N | 0.420874897 | None | None | N |
R/L | 0.5983 | likely_pathogenic | 0.5278 | ambiguous | 0.167 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
R/M | 0.7059 | likely_pathogenic | 0.6312 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.473735415 | None | None | N |
R/N | 0.9356 | likely_pathogenic | 0.9081 | pathogenic | -0.035 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
R/P | 0.8662 | likely_pathogenic | 0.802 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
R/Q | 0.2929 | likely_benign | 0.2433 | benign | -0.22 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
R/S | 0.912 | likely_pathogenic | 0.8848 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.509571317 | None | None | N |
R/T | 0.7194 | likely_pathogenic | 0.6593 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.444476902 | None | None | N |
R/V | 0.7579 | likely_pathogenic | 0.7044 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
R/W | 0.4375 | ambiguous | 0.3837 | ambiguous | -0.454 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.511046788 | None | None | N |
R/Y | 0.7781 | likely_pathogenic | 0.7175 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.