Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27540 | 82843;82844;82845 | chr2:178563514;178563513;178563512 | chr2:179428241;179428240;179428239 |
N2AB | 25899 | 77920;77921;77922 | chr2:178563514;178563513;178563512 | chr2:179428241;179428240;179428239 |
N2A | 24972 | 75139;75140;75141 | chr2:178563514;178563513;178563512 | chr2:179428241;179428240;179428239 |
N2B | 18475 | 55648;55649;55650 | chr2:178563514;178563513;178563512 | chr2:179428241;179428240;179428239 |
Novex-1 | 18600 | 56023;56024;56025 | chr2:178563514;178563513;178563512 | chr2:179428241;179428240;179428239 |
Novex-2 | 18667 | 56224;56225;56226 | chr2:178563514;178563513;178563512 | chr2:179428241;179428240;179428239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs913135593 | -2.114 | 1.0 | D | 0.857 | 0.802 | 0.868516351601 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs913135593 | -2.114 | 1.0 | D | 0.857 | 0.802 | 0.868516351601 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs913135593 | -2.114 | 1.0 | D | 0.857 | 0.802 | 0.868516351601 | gnomAD-4.0.0 | 3.84341E-06 | None | None | None | None | N | None | 5.07425E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9802 | likely_pathogenic | 0.988 | pathogenic | -3.291 | Highly Destabilizing | 0.991 | D | 0.842 | deleterious | None | None | None | None | N |
Y/C | 0.6989 | likely_pathogenic | 0.7784 | pathogenic | -1.83 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.657148698 | None | None | N |
Y/D | 0.9897 | likely_pathogenic | 0.9928 | pathogenic | -3.643 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | D | 0.657380863 | None | None | N |
Y/E | 0.9955 | likely_pathogenic | 0.9973 | pathogenic | -3.438 | Highly Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
Y/F | 0.2013 | likely_benign | 0.2678 | benign | -1.223 | Destabilizing | 0.117 | N | 0.536 | neutral | D | 0.615864469 | None | None | N |
Y/G | 0.9739 | likely_pathogenic | 0.9786 | pathogenic | -3.698 | Highly Destabilizing | 0.998 | D | 0.886 | deleterious | None | None | None | None | N |
Y/H | 0.921 | likely_pathogenic | 0.9526 | pathogenic | -2.309 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | D | 0.689419585 | None | None | N |
Y/I | 0.9156 | likely_pathogenic | 0.9418 | pathogenic | -1.923 | Destabilizing | 0.99 | D | 0.836 | deleterious | None | None | None | None | N |
Y/K | 0.9954 | likely_pathogenic | 0.9973 | pathogenic | -2.281 | Highly Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
Y/L | 0.8807 | likely_pathogenic | 0.8957 | pathogenic | -1.923 | Destabilizing | 0.966 | D | 0.791 | deleterious | None | None | None | None | N |
Y/M | 0.9444 | likely_pathogenic | 0.9643 | pathogenic | -1.619 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.943 | likely_pathogenic | 0.9607 | pathogenic | -3.058 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | D | 0.663679669 | None | None | N |
Y/P | 0.9973 | likely_pathogenic | 0.9975 | pathogenic | -2.396 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
Y/Q | 0.9906 | likely_pathogenic | 0.9948 | pathogenic | -2.822 | Highly Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
Y/R | 0.9808 | likely_pathogenic | 0.9863 | pathogenic | -2.0 | Highly Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
Y/S | 0.9366 | likely_pathogenic | 0.9563 | pathogenic | -3.389 | Highly Destabilizing | 0.997 | D | 0.875 | deleterious | D | 0.689419585 | None | None | N |
Y/T | 0.9716 | likely_pathogenic | 0.9833 | pathogenic | -3.068 | Highly Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | N |
Y/V | 0.791 | likely_pathogenic | 0.856 | pathogenic | -2.396 | Highly Destabilizing | 0.983 | D | 0.816 | deleterious | None | None | None | None | N |
Y/W | 0.6513 | likely_pathogenic | 0.7269 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.