Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2754582858;82859;82860 chr2:178563499;178563498;178563497chr2:179428226;179428225;179428224
N2AB2590477935;77936;77937 chr2:178563499;178563498;178563497chr2:179428226;179428225;179428224
N2A2497775154;75155;75156 chr2:178563499;178563498;178563497chr2:179428226;179428225;179428224
N2B1848055663;55664;55665 chr2:178563499;178563498;178563497chr2:179428226;179428225;179428224
Novex-11860556038;56039;56040 chr2:178563499;178563498;178563497chr2:179428226;179428225;179428224
Novex-21867256239;56240;56241 chr2:178563499;178563498;178563497chr2:179428226;179428225;179428224
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: A
  • RefSeq wild type transcript codon: GCT
  • RefSeq wild type template codon: CGA
  • Domain: Fn3-88
  • Domain position: 77
  • Structural Position: 109
  • Q(SASA): 0.114
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
A/T rs770320388 -1.689 0.09 N 0.68 0.055 0.19670166235 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.89E-06 0
A/T rs770320388 -1.689 0.09 N 0.68 0.055 0.19670166235 gnomAD-4.0.0 1.59126E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85827E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
A/C 0.2461 likely_benign 0.2512 benign -1.47 Destabilizing 0.944 D 0.744 deleterious None None None None N
A/D 0.6635 likely_pathogenic 0.6607 pathogenic -2.875 Highly Destabilizing 0.324 N 0.724 prob.delet. N 0.492893308 None None N
A/E 0.4966 ambiguous 0.4742 ambiguous -2.629 Highly Destabilizing 0.241 N 0.743 deleterious None None None None N
A/F 0.2249 likely_benign 0.2168 benign -0.723 Destabilizing 0.002 N 0.655 neutral None None None None N
A/G 0.1742 likely_benign 0.1984 benign -1.907 Destabilizing 0.09 N 0.714 prob.delet. N 0.486816921 None None N
A/H 0.4885 ambiguous 0.4697 ambiguous -2.288 Highly Destabilizing 0.818 D 0.738 prob.delet. None None None None N
A/I 0.24 likely_benign 0.2565 benign 0.005 Stabilizing 0.241 N 0.771 deleterious None None None None N
A/K 0.5944 likely_pathogenic 0.5901 pathogenic -1.448 Destabilizing 0.241 N 0.741 deleterious None None None None N
A/L 0.1399 likely_benign 0.1538 benign 0.005 Stabilizing 0.116 N 0.733 prob.delet. None None None None N
A/M 0.1441 likely_benign 0.1557 benign -0.409 Destabilizing 0.818 D 0.763 deleterious None None None None N
A/N 0.418 ambiguous 0.4267 ambiguous -1.902 Destabilizing 0.241 N 0.75 deleterious None None None None N
A/P 0.9713 likely_pathogenic 0.9799 pathogenic -0.422 Destabilizing 0.627 D 0.789 deleterious N 0.505174666 None None N
A/Q 0.3862 ambiguous 0.3857 ambiguous -1.621 Destabilizing 0.69 D 0.793 deleterious None None None None N
A/R 0.4829 ambiguous 0.4722 ambiguous -1.58 Destabilizing 0.69 D 0.785 deleterious None None None None N
A/S 0.0796 likely_benign 0.079 benign -2.282 Highly Destabilizing None N 0.281 neutral N 0.405081512 None None N
A/T 0.0819 likely_benign 0.0861 benign -1.91 Destabilizing 0.09 N 0.68 prob.neutral N 0.478827122 None None N
A/V 0.1316 likely_benign 0.1384 benign -0.422 Destabilizing 0.324 N 0.715 prob.delet. N 0.484291657 None None N
A/W 0.571 likely_pathogenic 0.56 ambiguous -1.564 Destabilizing 0.981 D 0.763 deleterious None None None None N
A/Y 0.3527 ambiguous 0.3275 benign -1.052 Destabilizing 0.527 D 0.757 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.