Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27545 | 82858;82859;82860 | chr2:178563499;178563498;178563497 | chr2:179428226;179428225;179428224 |
N2AB | 25904 | 77935;77936;77937 | chr2:178563499;178563498;178563497 | chr2:179428226;179428225;179428224 |
N2A | 24977 | 75154;75155;75156 | chr2:178563499;178563498;178563497 | chr2:179428226;179428225;179428224 |
N2B | 18480 | 55663;55664;55665 | chr2:178563499;178563498;178563497 | chr2:179428226;179428225;179428224 |
Novex-1 | 18605 | 56038;56039;56040 | chr2:178563499;178563498;178563497 | chr2:179428226;179428225;179428224 |
Novex-2 | 18672 | 56239;56240;56241 | chr2:178563499;178563498;178563497 | chr2:179428226;179428225;179428224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs770320388 | -1.689 | 0.09 | N | 0.68 | 0.055 | 0.19670166235 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
A/T | rs770320388 | -1.689 | 0.09 | N | 0.68 | 0.055 | 0.19670166235 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85827E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2461 | likely_benign | 0.2512 | benign | -1.47 | Destabilizing | 0.944 | D | 0.744 | deleterious | None | None | None | None | N |
A/D | 0.6635 | likely_pathogenic | 0.6607 | pathogenic | -2.875 | Highly Destabilizing | 0.324 | N | 0.724 | prob.delet. | N | 0.492893308 | None | None | N |
A/E | 0.4966 | ambiguous | 0.4742 | ambiguous | -2.629 | Highly Destabilizing | 0.241 | N | 0.743 | deleterious | None | None | None | None | N |
A/F | 0.2249 | likely_benign | 0.2168 | benign | -0.723 | Destabilizing | 0.002 | N | 0.655 | neutral | None | None | None | None | N |
A/G | 0.1742 | likely_benign | 0.1984 | benign | -1.907 | Destabilizing | 0.09 | N | 0.714 | prob.delet. | N | 0.486816921 | None | None | N |
A/H | 0.4885 | ambiguous | 0.4697 | ambiguous | -2.288 | Highly Destabilizing | 0.818 | D | 0.738 | prob.delet. | None | None | None | None | N |
A/I | 0.24 | likely_benign | 0.2565 | benign | 0.005 | Stabilizing | 0.241 | N | 0.771 | deleterious | None | None | None | None | N |
A/K | 0.5944 | likely_pathogenic | 0.5901 | pathogenic | -1.448 | Destabilizing | 0.241 | N | 0.741 | deleterious | None | None | None | None | N |
A/L | 0.1399 | likely_benign | 0.1538 | benign | 0.005 | Stabilizing | 0.116 | N | 0.733 | prob.delet. | None | None | None | None | N |
A/M | 0.1441 | likely_benign | 0.1557 | benign | -0.409 | Destabilizing | 0.818 | D | 0.763 | deleterious | None | None | None | None | N |
A/N | 0.418 | ambiguous | 0.4267 | ambiguous | -1.902 | Destabilizing | 0.241 | N | 0.75 | deleterious | None | None | None | None | N |
A/P | 0.9713 | likely_pathogenic | 0.9799 | pathogenic | -0.422 | Destabilizing | 0.627 | D | 0.789 | deleterious | N | 0.505174666 | None | None | N |
A/Q | 0.3862 | ambiguous | 0.3857 | ambiguous | -1.621 | Destabilizing | 0.69 | D | 0.793 | deleterious | None | None | None | None | N |
A/R | 0.4829 | ambiguous | 0.4722 | ambiguous | -1.58 | Destabilizing | 0.69 | D | 0.785 | deleterious | None | None | None | None | N |
A/S | 0.0796 | likely_benign | 0.079 | benign | -2.282 | Highly Destabilizing | None | N | 0.281 | neutral | N | 0.405081512 | None | None | N |
A/T | 0.0819 | likely_benign | 0.0861 | benign | -1.91 | Destabilizing | 0.09 | N | 0.68 | prob.neutral | N | 0.478827122 | None | None | N |
A/V | 0.1316 | likely_benign | 0.1384 | benign | -0.422 | Destabilizing | 0.324 | N | 0.715 | prob.delet. | N | 0.484291657 | None | None | N |
A/W | 0.571 | likely_pathogenic | 0.56 | ambiguous | -1.564 | Destabilizing | 0.981 | D | 0.763 | deleterious | None | None | None | None | N |
A/Y | 0.3527 | ambiguous | 0.3275 | benign | -1.052 | Destabilizing | 0.527 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.