Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27596 | 83011;83012;83013 | chr2:178563346;178563345;178563344 | chr2:179428073;179428072;179428071 |
N2AB | 25955 | 78088;78089;78090 | chr2:178563346;178563345;178563344 | chr2:179428073;179428072;179428071 |
N2A | 25028 | 75307;75308;75309 | chr2:178563346;178563345;178563344 | chr2:179428073;179428072;179428071 |
N2B | 18531 | 55816;55817;55818 | chr2:178563346;178563345;178563344 | chr2:179428073;179428072;179428071 |
Novex-1 | 18656 | 56191;56192;56193 | chr2:178563346;178563345;178563344 | chr2:179428073;179428072;179428071 |
Novex-2 | 18723 | 56392;56393;56394 | chr2:178563346;178563345;178563344 | chr2:179428073;179428072;179428071 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | N | 0.615 | 0.343 | 0.432604763906 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8913 | likely_pathogenic | 0.8975 | pathogenic | -0.87 | Destabilizing | 0.845 | D | 0.501 | neutral | None | None | None | None | I |
Y/C | 0.563 | ambiguous | 0.5667 | pathogenic | 0.024 | Stabilizing | 0.999 | D | 0.615 | neutral | N | 0.482365787 | None | None | I |
Y/D | 0.7838 | likely_pathogenic | 0.7952 | pathogenic | 0.911 | Stabilizing | 0.967 | D | 0.664 | neutral | N | 0.463833453 | None | None | I |
Y/E | 0.9536 | likely_pathogenic | 0.9574 | pathogenic | 0.895 | Stabilizing | 0.975 | D | 0.5 | neutral | None | None | None | None | I |
Y/F | 0.2577 | likely_benign | 0.249 | benign | -0.457 | Destabilizing | 0.944 | D | 0.473 | neutral | N | 0.506701583 | None | None | I |
Y/G | 0.8253 | likely_pathogenic | 0.8387 | pathogenic | -1.063 | Destabilizing | 0.845 | D | 0.555 | neutral | None | None | None | None | I |
Y/H | 0.6692 | likely_pathogenic | 0.6648 | pathogenic | 0.103 | Stabilizing | 0.994 | D | 0.553 | neutral | N | 0.463652421 | None | None | I |
Y/I | 0.9067 | likely_pathogenic | 0.898 | pathogenic | -0.381 | Destabilizing | 0.987 | D | 0.584 | neutral | None | None | None | None | I |
Y/K | 0.9417 | likely_pathogenic | 0.941 | pathogenic | 0.096 | Stabilizing | 0.975 | D | 0.518 | neutral | None | None | None | None | I |
Y/L | 0.8287 | likely_pathogenic | 0.818 | pathogenic | -0.381 | Destabilizing | 0.916 | D | 0.573 | neutral | None | None | None | None | I |
Y/M | 0.9117 | likely_pathogenic | 0.9101 | pathogenic | -0.14 | Destabilizing | 0.999 | D | 0.552 | neutral | None | None | None | None | I |
Y/N | 0.6304 | likely_pathogenic | 0.6539 | pathogenic | -0.079 | Destabilizing | 0.967 | D | 0.613 | neutral | N | 0.479706983 | None | None | I |
Y/P | 0.9839 | likely_pathogenic | 0.9848 | pathogenic | -0.524 | Destabilizing | 0.987 | D | 0.675 | neutral | None | None | None | None | I |
Y/Q | 0.9159 | likely_pathogenic | 0.9217 | pathogenic | -0.056 | Destabilizing | 0.975 | D | 0.579 | neutral | None | None | None | None | I |
Y/R | 0.8437 | likely_pathogenic | 0.8456 | pathogenic | 0.417 | Stabilizing | 0.975 | D | 0.619 | neutral | None | None | None | None | I |
Y/S | 0.5841 | likely_pathogenic | 0.6101 | pathogenic | -0.561 | Destabilizing | 0.204 | N | 0.404 | neutral | N | 0.468855271 | None | None | I |
Y/T | 0.8417 | likely_pathogenic | 0.8549 | pathogenic | -0.488 | Destabilizing | 0.95 | D | 0.479 | neutral | None | None | None | None | I |
Y/V | 0.8372 | likely_pathogenic | 0.8278 | pathogenic | -0.524 | Destabilizing | 0.975 | D | 0.54 | neutral | None | None | None | None | I |
Y/W | 0.6745 | likely_pathogenic | 0.6547 | pathogenic | -0.522 | Destabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.