Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27607 | 83044;83045;83046 | chr2:178563313;178563312;178563311 | chr2:179428040;179428039;179428038 |
N2AB | 25966 | 78121;78122;78123 | chr2:178563313;178563312;178563311 | chr2:179428040;179428039;179428038 |
N2A | 25039 | 75340;75341;75342 | chr2:178563313;178563312;178563311 | chr2:179428040;179428039;179428038 |
N2B | 18542 | 55849;55850;55851 | chr2:178563313;178563312;178563311 | chr2:179428040;179428039;179428038 |
Novex-1 | 18667 | 56224;56225;56226 | chr2:178563313;178563312;178563311 | chr2:179428040;179428039;179428038 |
Novex-2 | 18734 | 56425;56426;56427 | chr2:178563313;178563312;178563311 | chr2:179428040;179428039;179428038 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs752494467 | -2.548 | 0.334 | D | 0.613 | 0.517 | 0.662910326475 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/A | rs752494467 | -2.548 | 0.334 | D | 0.613 | 0.517 | 0.662910326475 | gnomAD-4.0.0 | 2.05281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69855E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7034 | likely_pathogenic | 0.6786 | pathogenic | -2.197 | Highly Destabilizing | 0.334 | N | 0.613 | neutral | D | 0.532095964 | None | None | N |
V/C | 0.9634 | likely_pathogenic | 0.9665 | pathogenic | -1.777 | Destabilizing | 0.982 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.9981 | likely_pathogenic | 0.9977 | pathogenic | -3.359 | Highly Destabilizing | 0.826 | D | 0.873 | deleterious | None | None | None | None | N |
V/E | 0.9924 | likely_pathogenic | 0.9912 | pathogenic | -3.029 | Highly Destabilizing | 0.781 | D | 0.863 | deleterious | D | 0.562316993 | None | None | N |
V/F | 0.8529 | likely_pathogenic | 0.8697 | pathogenic | -1.237 | Destabilizing | 0.7 | D | 0.805 | deleterious | None | None | None | None | N |
V/G | 0.9406 | likely_pathogenic | 0.931 | pathogenic | -2.823 | Highly Destabilizing | 0.781 | D | 0.875 | deleterious | D | 0.562316993 | None | None | N |
V/H | 0.9981 | likely_pathogenic | 0.9982 | pathogenic | -2.841 | Highly Destabilizing | 0.982 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.0792 | likely_benign | 0.0875 | benign | -0.374 | Destabilizing | 0.002 | N | 0.269 | neutral | N | 0.491164488 | None | None | N |
V/K | 0.9948 | likely_pathogenic | 0.9941 | pathogenic | -1.859 | Destabilizing | 0.826 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.3786 | ambiguous | 0.3815 | ambiguous | -0.374 | Destabilizing | 0.034 | N | 0.523 | neutral | N | 0.50421393 | None | None | N |
V/M | 0.5642 | likely_pathogenic | 0.5785 | pathogenic | -0.69 | Destabilizing | 0.7 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/N | 0.9941 | likely_pathogenic | 0.9939 | pathogenic | -2.586 | Highly Destabilizing | 0.935 | D | 0.883 | deleterious | None | None | None | None | N |
V/P | 0.9894 | likely_pathogenic | 0.9892 | pathogenic | -0.963 | Destabilizing | 0.935 | D | 0.868 | deleterious | None | None | None | None | N |
V/Q | 0.992 | likely_pathogenic | 0.9914 | pathogenic | -2.202 | Highly Destabilizing | 0.935 | D | 0.883 | deleterious | None | None | None | None | N |
V/R | 0.9892 | likely_pathogenic | 0.988 | pathogenic | -2.039 | Highly Destabilizing | 0.826 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.9613 | likely_pathogenic | 0.9584 | pathogenic | -3.081 | Highly Destabilizing | 0.826 | D | 0.865 | deleterious | None | None | None | None | N |
V/T | 0.8129 | likely_pathogenic | 0.7991 | pathogenic | -2.582 | Highly Destabilizing | 0.399 | N | 0.67 | neutral | None | None | None | None | N |
V/W | 0.9966 | likely_pathogenic | 0.9973 | pathogenic | -1.857 | Destabilizing | 0.982 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.9901 | likely_pathogenic | 0.9911 | pathogenic | -1.492 | Destabilizing | 0.826 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.