Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2761 | 8506;8507;8508 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
N2AB | 2761 | 8506;8507;8508 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
N2A | 2761 | 8506;8507;8508 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
N2B | 2715 | 8368;8369;8370 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
Novex-1 | 2715 | 8368;8369;8370 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
Novex-2 | 2715 | 8368;8369;8370 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
Novex-3 | 2761 | 8506;8507;8508 | chr2:178770511;178770510;178770509 | chr2:179635238;179635237;179635236 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.1 | 0.23 | 0.159798565429 | gnomAD-4.0.0 | 4.10441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39577E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1091 | likely_benign | 0.1304 | benign | -1.618 | Destabilizing | 0.007 | N | 0.285 | neutral | None | None | None | None | N |
I/C | 0.3529 | ambiguous | 0.4465 | ambiguous | -1.071 | Destabilizing | 0.356 | N | 0.532 | neutral | None | None | None | None | N |
I/D | 0.2353 | likely_benign | 0.3194 | benign | -0.713 | Destabilizing | 0.072 | N | 0.596 | neutral | None | None | None | None | N |
I/E | 0.2078 | likely_benign | 0.2553 | benign | -0.673 | Destabilizing | 0.072 | N | 0.585 | neutral | None | None | None | None | N |
I/F | 0.1258 | likely_benign | 0.1479 | benign | -1.033 | Destabilizing | 0.029 | N | 0.419 | neutral | N | 0.497328618 | None | None | N |
I/G | 0.264 | likely_benign | 0.3474 | ambiguous | -1.978 | Destabilizing | 0.038 | N | 0.543 | neutral | None | None | None | None | N |
I/H | 0.2032 | likely_benign | 0.2536 | benign | -1.184 | Destabilizing | 0.356 | N | 0.559 | neutral | None | None | None | None | N |
I/K | 0.1571 | likely_benign | 0.1924 | benign | -0.948 | Destabilizing | 0.038 | N | 0.583 | neutral | None | None | None | None | N |
I/L | 0.0908 | likely_benign | 0.0905 | benign | -0.692 | Destabilizing | None | N | 0.091 | neutral | N | 0.448040975 | None | None | N |
I/M | 0.0809 | likely_benign | 0.0839 | benign | -0.622 | Destabilizing | 0.093 | N | 0.458 | neutral | N | 0.514256809 | None | None | N |
I/N | 0.0761 | likely_benign | 0.1019 | benign | -0.806 | Destabilizing | 0.029 | N | 0.606 | neutral | N | 0.501850618 | None | None | N |
I/P | 0.732 | likely_pathogenic | 0.855 | pathogenic | -0.969 | Destabilizing | 0.136 | N | 0.619 | neutral | None | None | None | None | N |
I/Q | 0.1672 | likely_benign | 0.1997 | benign | -0.919 | Destabilizing | 0.214 | N | 0.608 | neutral | None | None | None | None | N |
I/R | 0.1212 | likely_benign | 0.1464 | benign | -0.485 | Destabilizing | 0.214 | N | 0.613 | neutral | None | None | None | None | N |
I/S | 0.0784 | likely_benign | 0.1049 | benign | -1.539 | Destabilizing | 0.001 | N | 0.28 | neutral | N | 0.451369596 | None | None | N |
I/T | 0.0701 | likely_benign | 0.0839 | benign | -1.372 | Destabilizing | None | N | 0.183 | neutral | N | 0.456562538 | None | None | N |
I/V | 0.0557 | likely_benign | 0.0579 | benign | -0.969 | Destabilizing | None | N | 0.1 | neutral | N | 0.356362154 | None | None | N |
I/W | 0.6062 | likely_pathogenic | 0.6882 | pathogenic | -1.107 | Destabilizing | 0.864 | D | 0.576 | neutral | None | None | None | None | N |
I/Y | 0.2664 | likely_benign | 0.3358 | benign | -0.86 | Destabilizing | 0.356 | N | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.