Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27612 | 83059;83060;83061 | chr2:178563298;178563297;178563296 | chr2:179428025;179428024;179428023 |
N2AB | 25971 | 78136;78137;78138 | chr2:178563298;178563297;178563296 | chr2:179428025;179428024;179428023 |
N2A | 25044 | 75355;75356;75357 | chr2:178563298;178563297;178563296 | chr2:179428025;179428024;179428023 |
N2B | 18547 | 55864;55865;55866 | chr2:178563298;178563297;178563296 | chr2:179428025;179428024;179428023 |
Novex-1 | 18672 | 56239;56240;56241 | chr2:178563298;178563297;178563296 | chr2:179428025;179428024;179428023 |
Novex-2 | 18739 | 56440;56441;56442 | chr2:178563298;178563297;178563296 | chr2:179428025;179428024;179428023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.015 | N | 0.352 | 0.128 | 0.366277470483 | gnomAD-4.0.0 | 2.0528E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69856E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4193 | ambiguous | 0.4355 | ambiguous | -0.88 | Destabilizing | 0.996 | D | 0.403 | neutral | None | None | None | None | N |
A/D | 0.2392 | likely_benign | 0.1997 | benign | -1.054 | Destabilizing | 0.015 | N | 0.352 | neutral | N | 0.500567832 | None | None | N |
A/E | 0.2074 | likely_benign | 0.1831 | benign | -1.183 | Destabilizing | 0.59 | D | 0.331 | neutral | None | None | None | None | N |
A/F | 0.2952 | likely_benign | 0.2946 | benign | -1.244 | Destabilizing | 0.91 | D | 0.546 | neutral | None | None | None | None | N |
A/G | 0.1193 | likely_benign | 0.1148 | benign | -0.895 | Destabilizing | 0.521 | D | 0.263 | neutral | N | 0.464975178 | None | None | N |
A/H | 0.4382 | ambiguous | 0.4059 | ambiguous | -0.866 | Destabilizing | 0.974 | D | 0.523 | neutral | None | None | None | None | N |
A/I | 0.1427 | likely_benign | 0.145 | benign | -0.623 | Destabilizing | 0.082 | N | 0.269 | neutral | None | None | None | None | N |
A/K | 0.3274 | likely_benign | 0.2898 | benign | -0.98 | Destabilizing | 0.742 | D | 0.387 | neutral | None | None | None | None | N |
A/L | 0.1434 | likely_benign | 0.1389 | benign | -0.623 | Destabilizing | 0.373 | N | 0.323 | neutral | None | None | None | None | N |
A/M | 0.1521 | likely_benign | 0.1517 | benign | -0.419 | Destabilizing | 0.953 | D | 0.423 | neutral | None | None | None | None | N |
A/N | 0.1901 | likely_benign | 0.1824 | benign | -0.64 | Destabilizing | 0.02 | N | 0.369 | neutral | None | None | None | None | N |
A/P | 0.2115 | likely_benign | 0.2025 | benign | -0.636 | Destabilizing | 0.939 | D | 0.437 | neutral | N | 0.467764767 | None | None | N |
A/Q | 0.2957 | likely_benign | 0.2704 | benign | -0.974 | Destabilizing | 0.91 | D | 0.44 | neutral | None | None | None | None | N |
A/R | 0.3637 | ambiguous | 0.3105 | benign | -0.426 | Destabilizing | 0.91 | D | 0.443 | neutral | None | None | None | None | N |
A/S | 0.0944 | likely_benign | 0.0935 | benign | -0.892 | Destabilizing | 0.028 | N | 0.222 | neutral | N | 0.470495641 | None | None | N |
A/T | 0.0806 | likely_benign | 0.0808 | benign | -0.947 | Destabilizing | 0.028 | N | 0.227 | neutral | N | 0.489273403 | None | None | N |
A/V | 0.0834 | likely_benign | 0.0842 | benign | -0.636 | Destabilizing | 0.007 | N | 0.217 | neutral | N | 0.441788887 | None | None | N |
A/W | 0.6824 | likely_pathogenic | 0.6571 | pathogenic | -1.381 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
A/Y | 0.4018 | ambiguous | 0.3971 | ambiguous | -1.048 | Destabilizing | 0.953 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.