Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2763 | 8512;8513;8514 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
N2AB | 2763 | 8512;8513;8514 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
N2A | 2763 | 8512;8513;8514 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
N2B | 2717 | 8374;8375;8376 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
Novex-1 | 2717 | 8374;8375;8376 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
Novex-2 | 2717 | 8374;8375;8376 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
Novex-3 | 2763 | 8512;8513;8514 | chr2:178770505;178770504;178770503 | chr2:179635232;179635231;179635230 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1231235466 | None | 0.093 | N | 0.615 | 0.356 | 0.684933780128 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.098 | likely_benign | 0.1011 | benign | -0.815 | Destabilizing | 0.005 | N | 0.406 | neutral | D | 0.5782874 | None | None | N |
S/C | 0.1101 | likely_benign | 0.1356 | benign | -0.474 | Destabilizing | 0.612 | D | 0.607 | neutral | D | 0.541227067 | None | None | N |
S/D | 0.356 | ambiguous | 0.3724 | ambiguous | -0.863 | Destabilizing | 0.072 | N | 0.554 | neutral | None | None | None | None | N |
S/E | 0.356 | ambiguous | 0.3611 | ambiguous | -0.674 | Destabilizing | 0.072 | N | 0.555 | neutral | None | None | None | None | N |
S/F | 0.2022 | likely_benign | 0.2101 | benign | -0.716 | Destabilizing | 0.093 | N | 0.615 | neutral | N | 0.512905716 | None | None | N |
S/G | 0.1282 | likely_benign | 0.1482 | benign | -1.219 | Destabilizing | 0.031 | N | 0.541 | neutral | None | None | None | None | N |
S/H | 0.2338 | likely_benign | 0.2179 | benign | -1.525 | Destabilizing | 0.001 | N | 0.445 | neutral | None | None | None | None | N |
S/I | 0.1568 | likely_benign | 0.1693 | benign | 0.21 | Stabilizing | 0.038 | N | 0.591 | neutral | None | None | None | None | N |
S/K | 0.5276 | ambiguous | 0.5187 | ambiguous | -0.003 | Destabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | N |
S/L | 0.1138 | likely_benign | 0.123 | benign | 0.21 | Stabilizing | None | N | 0.487 | neutral | None | None | None | None | N |
S/M | 0.1807 | likely_benign | 0.1589 | benign | 0.126 | Stabilizing | 0.12 | N | 0.613 | neutral | None | None | None | None | N |
S/N | 0.1266 | likely_benign | 0.124 | benign | -0.641 | Destabilizing | 0.072 | N | 0.577 | neutral | None | None | None | None | N |
S/P | 0.8811 | likely_pathogenic | 0.9193 | pathogenic | -0.096 | Destabilizing | 0.295 | N | 0.608 | neutral | D | 0.581772319 | None | None | N |
S/Q | 0.3686 | ambiguous | 0.353 | ambiguous | -0.413 | Destabilizing | 0.214 | N | 0.607 | neutral | None | None | None | None | N |
S/R | 0.4349 | ambiguous | 0.4334 | ambiguous | -0.416 | Destabilizing | 0.072 | N | 0.595 | neutral | None | None | None | None | N |
S/T | 0.0657 | likely_benign | 0.0597 | benign | -0.396 | Destabilizing | None | N | 0.254 | neutral | N | 0.432277111 | None | None | N |
S/V | 0.1717 | likely_benign | 0.1826 | benign | -0.096 | Destabilizing | 0.016 | N | 0.561 | neutral | None | None | None | None | N |
S/W | 0.3203 | likely_benign | 0.334 | benign | -0.882 | Destabilizing | 0.864 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/Y | 0.1591 | likely_benign | 0.1715 | benign | -0.438 | Destabilizing | 0.171 | N | 0.613 | neutral | D | 0.581772319 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.