Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27634 | 83125;83126;83127 | chr2:178563232;178563231;178563230 | chr2:179427959;179427958;179427957 |
N2AB | 25993 | 78202;78203;78204 | chr2:178563232;178563231;178563230 | chr2:179427959;179427958;179427957 |
N2A | 25066 | 75421;75422;75423 | chr2:178563232;178563231;178563230 | chr2:179427959;179427958;179427957 |
N2B | 18569 | 55930;55931;55932 | chr2:178563232;178563231;178563230 | chr2:179427959;179427958;179427957 |
Novex-1 | 18694 | 56305;56306;56307 | chr2:178563232;178563231;178563230 | chr2:179427959;179427958;179427957 |
Novex-2 | 18761 | 56506;56507;56508 | chr2:178563232;178563231;178563230 | chr2:179427959;179427958;179427957 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs780363524 | -0.129 | 0.996 | N | 0.559 | 0.372 | None | gnomAD-2.1.1 | 1.16795E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 6.49712E-04 | 1.24819E-04 | 1.65837E-04 |
T/I | rs780363524 | -0.129 | 0.996 | N | 0.559 | 0.372 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs780363524 | -0.129 | 0.996 | N | 0.559 | 0.372 | None | gnomAD-4.0.0 | 6.02226E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.82353E-04 | 0 | 5.98358E-05 | 0 | 1.13779E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0838 | likely_benign | 0.0874 | benign | -0.534 | Destabilizing | 0.826 | D | 0.397 | neutral | N | 0.508286025 | None | None | N |
T/C | 0.3505 | ambiguous | 0.384 | ambiguous | -0.317 | Destabilizing | 0.999 | D | 0.548 | neutral | None | None | None | None | N |
T/D | 0.3049 | likely_benign | 0.283 | benign | 0.379 | Stabilizing | 0.969 | D | 0.503 | neutral | None | None | None | None | N |
T/E | 0.2204 | likely_benign | 0.1949 | benign | 0.318 | Stabilizing | 0.939 | D | 0.437 | neutral | None | None | None | None | N |
T/F | 0.2665 | likely_benign | 0.2821 | benign | -0.965 | Destabilizing | 0.997 | D | 0.615 | neutral | None | None | None | None | N |
T/G | 0.163 | likely_benign | 0.167 | benign | -0.686 | Destabilizing | 0.969 | D | 0.513 | neutral | None | None | None | None | N |
T/H | 0.2305 | likely_benign | 0.2286 | benign | -0.968 | Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | N |
T/I | 0.1683 | likely_benign | 0.1906 | benign | -0.249 | Destabilizing | 0.996 | D | 0.559 | neutral | N | 0.475602428 | None | None | N |
T/K | 0.1618 | likely_benign | 0.1486 | benign | -0.355 | Destabilizing | 0.079 | N | 0.23 | neutral | None | None | None | None | N |
T/L | 0.0842 | likely_benign | 0.0929 | benign | -0.249 | Destabilizing | 0.969 | D | 0.448 | neutral | None | None | None | None | N |
T/M | 0.0861 | likely_benign | 0.0926 | benign | -0.043 | Destabilizing | 0.997 | D | 0.551 | neutral | None | None | None | None | N |
T/N | 0.1063 | likely_benign | 0.1105 | benign | -0.161 | Destabilizing | 0.959 | D | 0.424 | neutral | N | 0.512441051 | None | None | N |
T/P | 0.0856 | likely_benign | 0.0818 | benign | -0.315 | Destabilizing | 0.996 | D | 0.55 | neutral | N | 0.514673279 | None | None | N |
T/Q | 0.1559 | likely_benign | 0.1481 | benign | -0.368 | Destabilizing | 0.982 | D | 0.535 | neutral | None | None | None | None | N |
T/R | 0.1623 | likely_benign | 0.1471 | benign | -0.117 | Destabilizing | 0.046 | N | 0.323 | neutral | None | None | None | None | N |
T/S | 0.0954 | likely_benign | 0.0982 | benign | -0.443 | Destabilizing | 0.826 | D | 0.405 | neutral | N | 0.490486911 | None | None | N |
T/V | 0.1238 | likely_benign | 0.1399 | benign | -0.315 | Destabilizing | 0.969 | D | 0.373 | neutral | None | None | None | None | N |
T/W | 0.5699 | likely_pathogenic | 0.5578 | ambiguous | -0.926 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
T/Y | 0.307 | likely_benign | 0.3136 | benign | -0.656 | Destabilizing | 0.997 | D | 0.618 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.