Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27641 | 83146;83147;83148 | chr2:178563211;178563210;178563209 | chr2:179427938;179427937;179427936 |
N2AB | 26000 | 78223;78224;78225 | chr2:178563211;178563210;178563209 | chr2:179427938;179427937;179427936 |
N2A | 25073 | 75442;75443;75444 | chr2:178563211;178563210;178563209 | chr2:179427938;179427937;179427936 |
N2B | 18576 | 55951;55952;55953 | chr2:178563211;178563210;178563209 | chr2:179427938;179427937;179427936 |
Novex-1 | 18701 | 56326;56327;56328 | chr2:178563211;178563210;178563209 | chr2:179427938;179427937;179427936 |
Novex-2 | 18768 | 56527;56528;56529 | chr2:178563211;178563210;178563209 | chr2:179427938;179427937;179427936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.589 | 0.389 | 0.354396617058 | gnomAD-4.0.0 | 6.84252E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65684E-05 |
E/Q | None | None | 1.0 | N | 0.614 | 0.395 | 0.273938319068 | gnomAD-4.0.0 | 2.05276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69857E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1024 | likely_benign | 0.0978 | benign | -1.127 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.47257378 | None | None | N |
E/C | 0.7771 | likely_pathogenic | 0.7661 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.1922 | likely_benign | 0.1942 | benign | -0.987 | Destabilizing | 0.999 | D | 0.462 | neutral | N | 0.477168909 | None | None | N |
E/F | 0.7436 | likely_pathogenic | 0.7221 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/G | 0.1885 | likely_benign | 0.1666 | benign | -1.46 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.495553107 | None | None | N |
E/H | 0.4368 | ambiguous | 0.4216 | ambiguous | -0.905 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.2836 | likely_benign | 0.2722 | benign | -0.217 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/K | 0.1338 | likely_benign | 0.1255 | benign | -0.496 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.50764852 | None | None | N |
E/L | 0.3316 | likely_benign | 0.3113 | benign | -0.217 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/M | 0.3753 | ambiguous | 0.3582 | ambiguous | 0.315 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/N | 0.2564 | likely_benign | 0.2569 | benign | -0.953 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/P | 0.3457 | ambiguous | 0.3373 | benign | -0.5 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/Q | 0.1166 | likely_benign | 0.1103 | benign | -0.861 | Destabilizing | 1.0 | D | 0.614 | neutral | N | 0.475674425 | None | None | N |
E/R | 0.2416 | likely_benign | 0.2248 | benign | -0.27 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/S | 0.1699 | likely_benign | 0.166 | benign | -1.269 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
E/T | 0.1551 | likely_benign | 0.1611 | benign | -0.984 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/V | 0.1582 | likely_benign | 0.1516 | benign | -0.5 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.479183599 | None | None | N |
E/W | 0.9209 | likely_pathogenic | 0.9031 | pathogenic | -0.397 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/Y | 0.6467 | likely_pathogenic | 0.622 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.