Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27643 | 83152;83153;83154 | chr2:178563205;178563204;178563203 | chr2:179427932;179427931;179427930 |
N2AB | 26002 | 78229;78230;78231 | chr2:178563205;178563204;178563203 | chr2:179427932;179427931;179427930 |
N2A | 25075 | 75448;75449;75450 | chr2:178563205;178563204;178563203 | chr2:179427932;179427931;179427930 |
N2B | 18578 | 55957;55958;55959 | chr2:178563205;178563204;178563203 | chr2:179427932;179427931;179427930 |
Novex-1 | 18703 | 56332;56333;56334 | chr2:178563205;178563204;178563203 | chr2:179427932;179427931;179427930 |
Novex-2 | 18770 | 56533;56534;56535 | chr2:178563205;178563204;178563203 | chr2:179427932;179427931;179427930 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1457183253 | -1.802 | 0.379 | N | 0.634 | 0.134 | 0.177238962908 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/D | rs1457183253 | -1.802 | 0.379 | N | 0.634 | 0.134 | 0.177238962908 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14422E-04 | 0 |
N/D | rs1457183253 | -1.802 | 0.379 | N | 0.634 | 0.134 | 0.177238962908 | gnomAD-4.0.0 | 7.68596E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.04074E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1513 | likely_benign | 0.1752 | benign | -1.734 | Destabilizing | 0.25 | N | 0.587 | neutral | None | None | None | None | N |
N/C | 0.1071 | likely_benign | 0.133 | benign | -0.68 | Destabilizing | 0.026 | N | 0.577 | neutral | None | None | None | None | N |
N/D | 0.1566 | likely_benign | 0.1548 | benign | -1.767 | Destabilizing | 0.379 | N | 0.634 | neutral | N | 0.503936211 | None | None | N |
N/E | 0.3033 | likely_benign | 0.3227 | benign | -1.469 | Destabilizing | 0.005 | N | 0.463 | neutral | None | None | None | None | N |
N/F | 0.3324 | likely_benign | 0.3797 | ambiguous | -1.109 | Destabilizing | 0.92 | D | 0.682 | prob.neutral | None | None | None | None | N |
N/G | 0.2778 | likely_benign | 0.3065 | benign | -2.157 | Highly Destabilizing | 0.25 | N | 0.594 | neutral | None | None | None | None | N |
N/H | 0.0693 | likely_benign | 0.0759 | benign | -1.242 | Destabilizing | 0.896 | D | 0.593 | neutral | N | 0.477000326 | None | None | N |
N/I | 0.1117 | likely_benign | 0.1233 | benign | -0.564 | Destabilizing | 0.81 | D | 0.67 | neutral | N | 0.465687254 | None | None | N |
N/K | 0.2466 | likely_benign | 0.254 | benign | -0.088 | Destabilizing | 0.016 | N | 0.467 | neutral | N | 0.403329286 | None | None | N |
N/L | 0.1336 | likely_benign | 0.1461 | benign | -0.564 | Destabilizing | 0.447 | N | 0.593 | neutral | None | None | None | None | N |
N/M | 0.2062 | likely_benign | 0.2452 | benign | -0.434 | Destabilizing | 0.992 | D | 0.637 | neutral | None | None | None | None | N |
N/P | 0.908 | likely_pathogenic | 0.8888 | pathogenic | -0.932 | Destabilizing | 0.92 | D | 0.618 | neutral | None | None | None | None | N |
N/Q | 0.2031 | likely_benign | 0.2279 | benign | -0.622 | Destabilizing | 0.739 | D | 0.58 | neutral | None | None | None | None | N |
N/R | 0.2427 | likely_benign | 0.2458 | benign | -0.234 | Destabilizing | 0.447 | N | 0.563 | neutral | None | None | None | None | N |
N/S | 0.0668 | likely_benign | 0.0722 | benign | -1.303 | Destabilizing | 0.007 | N | 0.295 | neutral | N | 0.440250092 | None | None | N |
N/T | 0.089 | likely_benign | 0.1 | benign | -0.805 | Destabilizing | 0.379 | N | 0.597 | neutral | N | 0.442442248 | None | None | N |
N/V | 0.1179 | likely_benign | 0.1335 | benign | -0.932 | Destabilizing | 0.617 | D | 0.645 | neutral | None | None | None | None | N |
N/W | 0.6393 | likely_pathogenic | 0.655 | pathogenic | -0.861 | Destabilizing | 0.992 | D | 0.724 | prob.delet. | None | None | None | None | N |
N/Y | 0.1155 | likely_benign | 0.1231 | benign | -0.58 | Destabilizing | 0.963 | D | 0.639 | neutral | N | 0.473133301 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.