Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2767 | 8524;8525;8526 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
N2AB | 2767 | 8524;8525;8526 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
N2A | 2767 | 8524;8525;8526 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
N2B | 2721 | 8386;8387;8388 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
Novex-1 | 2721 | 8386;8387;8388 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
Novex-2 | 2721 | 8386;8387;8388 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
Novex-3 | 2767 | 8524;8525;8526 | chr2:178770493;178770492;178770491 | chr2:179635220;179635219;179635218 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.733 | N | 0.256 | 0.161 | 0.188950314367 | gnomAD-4.0.0 | 1.59052E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77362E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.217 | N | 0.281 | 0.225 | 0.247322355667 | gnomAD-4.0.0 | 1.59051E-06 | None | None | None | None | N | None | 5.65163E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3441 | ambiguous | 0.3786 | ambiguous | -0.523 | Destabilizing | 0.996 | D | 0.486 | neutral | None | None | None | None | N |
K/C | 0.6822 | likely_pathogenic | 0.7197 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/D | 0.5575 | ambiguous | 0.6032 | pathogenic | -0.645 | Destabilizing | 0.995 | D | 0.552 | neutral | None | None | None | None | N |
K/E | 0.1521 | likely_benign | 0.1593 | benign | -0.546 | Destabilizing | 0.989 | D | 0.461 | neutral | D | 0.537709462 | None | None | N |
K/F | 0.7329 | likely_pathogenic | 0.7786 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/G | 0.4125 | ambiguous | 0.4523 | ambiguous | -0.883 | Destabilizing | 0.992 | D | 0.571 | neutral | None | None | None | None | N |
K/H | 0.2919 | likely_benign | 0.3044 | benign | -1.362 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
K/I | 0.3591 | ambiguous | 0.4101 | ambiguous | 0.405 | Stabilizing | 0.999 | D | 0.728 | prob.delet. | D | 0.598383171 | None | None | N |
K/L | 0.3482 | ambiguous | 0.3869 | ambiguous | 0.405 | Stabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
K/M | 0.2529 | likely_benign | 0.2714 | benign | 0.407 | Stabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
K/N | 0.3327 | likely_benign | 0.3745 | ambiguous | -0.723 | Destabilizing | 0.733 | D | 0.256 | neutral | N | 0.508205632 | None | None | N |
K/P | 0.7145 | likely_pathogenic | 0.7542 | pathogenic | 0.127 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
K/Q | 0.1112 | likely_benign | 0.1119 | benign | -0.844 | Destabilizing | 0.997 | D | 0.52 | neutral | D | 0.590564712 | None | None | N |
K/R | 0.0794 | likely_benign | 0.0775 | benign | -0.75 | Destabilizing | 0.217 | N | 0.281 | neutral | N | 0.502409139 | None | None | N |
K/S | 0.3531 | ambiguous | 0.3909 | ambiguous | -1.288 | Destabilizing | 0.992 | D | 0.443 | neutral | None | None | None | None | N |
K/T | 0.1784 | likely_benign | 0.1909 | benign | -0.989 | Destabilizing | 0.989 | D | 0.537 | neutral | D | 0.57063728 | None | None | N |
K/V | 0.3567 | ambiguous | 0.403 | ambiguous | 0.127 | Stabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/W | 0.7139 | likely_pathogenic | 0.7248 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/Y | 0.6043 | likely_pathogenic | 0.6441 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.