Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27687 | 83284;83285;83286 | chr2:178563073;178563072;178563071 | chr2:179427800;179427799;179427798 |
N2AB | 26046 | 78361;78362;78363 | chr2:178563073;178563072;178563071 | chr2:179427800;179427799;179427798 |
N2A | 25119 | 75580;75581;75582 | chr2:178563073;178563072;178563071 | chr2:179427800;179427799;179427798 |
N2B | 18622 | 56089;56090;56091 | chr2:178563073;178563072;178563071 | chr2:179427800;179427799;179427798 |
Novex-1 | 18747 | 56464;56465;56466 | chr2:178563073;178563072;178563071 | chr2:179427800;179427799;179427798 |
Novex-2 | 18814 | 56665;56666;56667 | chr2:178563073;178563072;178563071 | chr2:179427800;179427799;179427798 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.001 | N | 0.127 | 0.077 | 0.483224754729 | gnomAD-4.0.0 | 6.84239E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99517E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5245 | ambiguous | 0.5855 | pathogenic | -1.893 | Destabilizing | 0.373 | N | 0.384 | neutral | None | None | None | None | I |
L/C | 0.6644 | likely_pathogenic | 0.6805 | pathogenic | -1.241 | Destabilizing | 0.996 | D | 0.489 | neutral | None | None | None | None | I |
L/D | 0.9845 | likely_pathogenic | 0.9839 | pathogenic | -1.416 | Destabilizing | 0.984 | D | 0.539 | neutral | None | None | None | None | I |
L/E | 0.9048 | likely_pathogenic | 0.9054 | pathogenic | -1.282 | Destabilizing | 0.953 | D | 0.545 | neutral | None | None | None | None | I |
L/F | 0.5684 | likely_pathogenic | 0.5585 | ambiguous | -1.033 | Destabilizing | 0.91 | D | 0.513 | neutral | None | None | None | None | I |
L/G | 0.8745 | likely_pathogenic | 0.8956 | pathogenic | -2.349 | Highly Destabilizing | 0.953 | D | 0.545 | neutral | None | None | None | None | I |
L/H | 0.8201 | likely_pathogenic | 0.8173 | pathogenic | -1.621 | Destabilizing | 0.996 | D | 0.512 | neutral | None | None | None | None | I |
L/I | 0.0911 | likely_benign | 0.0999 | benign | -0.647 | Destabilizing | 0.016 | N | 0.137 | neutral | None | None | None | None | I |
L/K | 0.8626 | likely_pathogenic | 0.8599 | pathogenic | -1.432 | Destabilizing | 0.953 | D | 0.497 | neutral | None | None | None | None | I |
L/M | 0.1914 | likely_benign | 0.1967 | benign | -0.587 | Destabilizing | 0.939 | D | 0.531 | neutral | N | 0.521207755 | None | None | I |
L/N | 0.8716 | likely_pathogenic | 0.885 | pathogenic | -1.517 | Destabilizing | 0.984 | D | 0.555 | neutral | None | None | None | None | I |
L/P | 0.9597 | likely_pathogenic | 0.9662 | pathogenic | -1.035 | Destabilizing | 0.979 | D | 0.541 | neutral | N | 0.489886746 | None | None | I |
L/Q | 0.6481 | likely_pathogenic | 0.6701 | pathogenic | -1.483 | Destabilizing | 0.979 | D | 0.499 | neutral | D | 0.535291773 | None | None | I |
L/R | 0.8043 | likely_pathogenic | 0.802 | pathogenic | -1.052 | Destabilizing | 0.939 | D | 0.504 | neutral | D | 0.535118414 | None | None | I |
L/S | 0.7491 | likely_pathogenic | 0.782 | pathogenic | -2.24 | Highly Destabilizing | 0.854 | D | 0.478 | neutral | None | None | None | None | I |
L/T | 0.4686 | ambiguous | 0.5171 | ambiguous | -1.97 | Destabilizing | 0.742 | D | 0.417 | neutral | None | None | None | None | I |
L/V | 0.0872 | likely_benign | 0.0958 | benign | -1.035 | Destabilizing | 0.001 | N | 0.127 | neutral | N | 0.357871929 | None | None | I |
L/W | 0.8833 | likely_pathogenic | 0.8679 | pathogenic | -1.275 | Destabilizing | 0.996 | D | 0.489 | neutral | None | None | None | None | I |
L/Y | 0.8814 | likely_pathogenic | 0.8738 | pathogenic | -0.987 | Destabilizing | 0.953 | D | 0.511 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.