Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27706 | 83341;83342;83343 | chr2:178563016;178563015;178563014 | chr2:179427743;179427742;179427741 |
N2AB | 26065 | 78418;78419;78420 | chr2:178563016;178563015;178563014 | chr2:179427743;179427742;179427741 |
N2A | 25138 | 75637;75638;75639 | chr2:178563016;178563015;178563014 | chr2:179427743;179427742;179427741 |
N2B | 18641 | 56146;56147;56148 | chr2:178563016;178563015;178563014 | chr2:179427743;179427742;179427741 |
Novex-1 | 18766 | 56521;56522;56523 | chr2:178563016;178563015;178563014 | chr2:179427743;179427742;179427741 |
Novex-2 | 18833 | 56722;56723;56724 | chr2:178563016;178563015;178563014 | chr2:179427743;179427742;179427741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs72648217 | 0.196 | 0.287 | N | 0.329 | 0.288 | 0.296679040009 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 1.78E-05 | 0 |
E/K | rs72648217 | 0.196 | 0.287 | N | 0.329 | 0.288 | 0.296679040009 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 4.1425E-04 | 0 |
E/K | rs72648217 | 0.196 | 0.287 | N | 0.329 | 0.288 | 0.296679040009 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs72648217 | 0.196 | 0.287 | N | 0.329 | 0.288 | 0.296679040009 | gnomAD-4.0.0 | 2.29294E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.11921E-05 | 1.31755E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1268 | likely_benign | 0.126 | benign | -0.369 | Destabilizing | 0.919 | D | 0.551 | neutral | D | 0.529904596 | None | None | N |
E/C | 0.792 | likely_pathogenic | 0.7988 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/D | 0.1598 | likely_benign | 0.1515 | benign | -0.452 | Destabilizing | 0.958 | D | 0.402 | neutral | N | 0.493974897 | None | None | N |
E/F | 0.7281 | likely_pathogenic | 0.7303 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/G | 0.2333 | likely_benign | 0.2403 | benign | -0.587 | Destabilizing | 0.988 | D | 0.665 | neutral | D | 0.536819678 | None | None | N |
E/H | 0.3941 | ambiguous | 0.3981 | ambiguous | -0.044 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.2325 | likely_benign | 0.2262 | benign | 0.178 | Stabilizing | 0.995 | D | 0.789 | deleterious | None | None | None | None | N |
E/K | 0.1296 | likely_benign | 0.1282 | benign | 0.087 | Stabilizing | 0.287 | N | 0.329 | neutral | N | 0.490884848 | None | None | N |
E/L | 0.3049 | likely_benign | 0.3086 | benign | 0.178 | Stabilizing | 0.991 | D | 0.744 | deleterious | None | None | None | None | N |
E/M | 0.3508 | ambiguous | 0.3522 | ambiguous | 0.217 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
E/N | 0.2158 | likely_benign | 0.2041 | benign | -0.167 | Destabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | N |
E/P | 0.9096 | likely_pathogenic | 0.9064 | pathogenic | 0.017 | Stabilizing | 0.995 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Q | 0.1218 | likely_benign | 0.1265 | benign | -0.122 | Destabilizing | 0.983 | D | 0.531 | neutral | N | 0.486719968 | None | None | N |
E/R | 0.2332 | likely_benign | 0.2308 | benign | 0.345 | Stabilizing | 0.982 | D | 0.619 | neutral | None | None | None | None | N |
E/S | 0.1733 | likely_benign | 0.1698 | benign | -0.352 | Destabilizing | 0.968 | D | 0.523 | neutral | None | None | None | None | N |
E/T | 0.1466 | likely_benign | 0.1443 | benign | -0.182 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/V | 0.1368 | likely_benign | 0.1357 | benign | 0.017 | Stabilizing | 0.988 | D | 0.739 | prob.delet. | D | 0.525133494 | None | None | N |
E/W | 0.9103 | likely_pathogenic | 0.9132 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/Y | 0.6315 | likely_pathogenic | 0.6296 | pathogenic | 0.007 | Stabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.