Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27712 | 83359;83360;83361 | chr2:178562998;178562997;178562996 | chr2:179427725;179427724;179427723 |
N2AB | 26071 | 78436;78437;78438 | chr2:178562998;178562997;178562996 | chr2:179427725;179427724;179427723 |
N2A | 25144 | 75655;75656;75657 | chr2:178562998;178562997;178562996 | chr2:179427725;179427724;179427723 |
N2B | 18647 | 56164;56165;56166 | chr2:178562998;178562997;178562996 | chr2:179427725;179427724;179427723 |
Novex-1 | 18772 | 56539;56540;56541 | chr2:178562998;178562997;178562996 | chr2:179427725;179427724;179427723 |
Novex-2 | 18839 | 56740;56741;56742 | chr2:178562998;178562997;178562996 | chr2:179427725;179427724;179427723 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.892 | N | 0.445 | 0.2 | 0.28492961333 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77454E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/V | None | None | 0.025 | N | 0.305 | 0.085 | 0.227260227426 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5098 | ambiguous | 0.5189 | ambiguous | -0.699 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
A/D | 0.2726 | likely_benign | 0.2599 | benign | -0.821 | Destabilizing | 0.95 | D | 0.543 | neutral | None | None | None | None | I |
A/E | 0.2367 | likely_benign | 0.219 | benign | -0.978 | Destabilizing | 0.204 | N | 0.353 | neutral | N | 0.375379389 | None | None | I |
A/F | 0.4112 | ambiguous | 0.409 | ambiguous | -1.069 | Destabilizing | 0.975 | D | 0.618 | neutral | None | None | None | None | I |
A/G | 0.1227 | likely_benign | 0.1219 | benign | -0.553 | Destabilizing | 0.944 | D | 0.443 | neutral | N | 0.413857632 | None | None | I |
A/H | 0.5255 | ambiguous | 0.5265 | ambiguous | -0.636 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
A/I | 0.2541 | likely_benign | 0.2494 | benign | -0.472 | Destabilizing | 0.845 | D | 0.498 | neutral | None | None | None | None | I |
A/K | 0.4948 | ambiguous | 0.4658 | ambiguous | -0.835 | Destabilizing | 0.975 | D | 0.456 | neutral | None | None | None | None | I |
A/L | 0.188 | likely_benign | 0.1922 | benign | -0.472 | Destabilizing | 0.845 | D | 0.491 | neutral | None | None | None | None | I |
A/M | 0.2108 | likely_benign | 0.2098 | benign | -0.36 | Destabilizing | 0.997 | D | 0.51 | neutral | None | None | None | None | I |
A/N | 0.2015 | likely_benign | 0.1997 | benign | -0.408 | Destabilizing | 0.987 | D | 0.604 | neutral | None | None | None | None | I |
A/P | 0.3212 | likely_benign | 0.338 | benign | -0.44 | Destabilizing | 0.994 | D | 0.509 | neutral | N | 0.442777817 | None | None | I |
A/Q | 0.3223 | likely_benign | 0.3125 | benign | -0.748 | Destabilizing | 0.975 | D | 0.511 | neutral | None | None | None | None | I |
A/R | 0.5104 | ambiguous | 0.4825 | ambiguous | -0.305 | Destabilizing | 0.975 | D | 0.51 | neutral | None | None | None | None | I |
A/S | 0.0912 | likely_benign | 0.0914 | benign | -0.584 | Destabilizing | 0.892 | D | 0.461 | neutral | N | 0.453013453 | None | None | I |
A/T | 0.093 | likely_benign | 0.0913 | benign | -0.675 | Destabilizing | 0.892 | D | 0.445 | neutral | N | 0.507309298 | None | None | I |
A/V | 0.1242 | likely_benign | 0.1231 | benign | -0.44 | Destabilizing | 0.025 | N | 0.305 | neutral | N | 0.45495768 | None | None | I |
A/W | 0.7886 | likely_pathogenic | 0.7806 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | I |
A/Y | 0.519 | ambiguous | 0.5067 | ambiguous | -0.869 | Destabilizing | 0.987 | D | 0.613 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.