Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27734 | 83425;83426;83427 | chr2:178562932;178562931;178562930 | chr2:179427659;179427658;179427657 |
N2AB | 26093 | 78502;78503;78504 | chr2:178562932;178562931;178562930 | chr2:179427659;179427658;179427657 |
N2A | 25166 | 75721;75722;75723 | chr2:178562932;178562931;178562930 | chr2:179427659;179427658;179427657 |
N2B | 18669 | 56230;56231;56232 | chr2:178562932;178562931;178562930 | chr2:179427659;179427658;179427657 |
Novex-1 | 18794 | 56605;56606;56607 | chr2:178562932;178562931;178562930 | chr2:179427659;179427658;179427657 |
Novex-2 | 18861 | 56806;56807;56808 | chr2:178562932;178562931;178562930 | chr2:179427659;179427658;179427657 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.983 | N | 0.479 | 0.339 | 0.403896168776 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85861E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4221 | ambiguous | 0.4201 | ambiguous | -0.398 | Destabilizing | 0.892 | D | 0.515 | neutral | N | 0.515068429 | None | None | I |
D/C | 0.8868 | likely_pathogenic | 0.8874 | pathogenic | -0.024 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
D/E | 0.2426 | likely_benign | 0.2485 | benign | -0.647 | Destabilizing | 0.099 | N | 0.297 | neutral | N | 0.437511723 | None | None | I |
D/F | 0.9395 | likely_pathogenic | 0.9413 | pathogenic | -0.431 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
D/G | 0.2869 | likely_benign | 0.2853 | benign | -0.672 | Destabilizing | 0.892 | D | 0.535 | neutral | N | 0.500928483 | None | None | I |
D/H | 0.605 | likely_pathogenic | 0.616 | pathogenic | -0.733 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.521226397 | None | None | I |
D/I | 0.8687 | likely_pathogenic | 0.8743 | pathogenic | 0.296 | Stabilizing | 0.987 | D | 0.644 | neutral | None | None | None | None | I |
D/K | 0.6989 | likely_pathogenic | 0.7074 | pathogenic | -0.035 | Destabilizing | 0.975 | D | 0.525 | neutral | None | None | None | None | I |
D/L | 0.8131 | likely_pathogenic | 0.8157 | pathogenic | 0.296 | Stabilizing | 0.975 | D | 0.646 | neutral | None | None | None | None | I |
D/M | 0.9226 | likely_pathogenic | 0.9237 | pathogenic | 0.682 | Stabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
D/N | 0.1892 | likely_benign | 0.1925 | benign | -0.316 | Destabilizing | 0.983 | D | 0.479 | neutral | N | 0.504102074 | None | None | I |
D/P | 0.6792 | likely_pathogenic | 0.6491 | pathogenic | 0.089 | Stabilizing | 0.073 | N | 0.346 | neutral | None | None | None | None | I |
D/Q | 0.5845 | likely_pathogenic | 0.5965 | pathogenic | -0.271 | Destabilizing | 0.975 | D | 0.519 | neutral | None | None | None | None | I |
D/R | 0.7256 | likely_pathogenic | 0.7384 | pathogenic | -0.022 | Destabilizing | 0.975 | D | 0.571 | neutral | None | None | None | None | I |
D/S | 0.2482 | likely_benign | 0.2478 | benign | -0.513 | Destabilizing | 0.916 | D | 0.481 | neutral | None | None | None | None | I |
D/T | 0.5357 | ambiguous | 0.5384 | ambiguous | -0.297 | Destabilizing | 0.975 | D | 0.514 | neutral | None | None | None | None | I |
D/V | 0.6955 | likely_pathogenic | 0.7006 | pathogenic | 0.089 | Stabilizing | 0.983 | D | 0.641 | neutral | D | 0.536483851 | None | None | I |
D/W | 0.9794 | likely_pathogenic | 0.9815 | pathogenic | -0.35 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
D/Y | 0.6692 | likely_pathogenic | 0.6777 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.609 | neutral | D | 0.530384598 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.