Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27745 | 83458;83459;83460 | chr2:178562899;178562898;178562897 | chr2:179427626;179427625;179427624 |
N2AB | 26104 | 78535;78536;78537 | chr2:178562899;178562898;178562897 | chr2:179427626;179427625;179427624 |
N2A | 25177 | 75754;75755;75756 | chr2:178562899;178562898;178562897 | chr2:179427626;179427625;179427624 |
N2B | 18680 | 56263;56264;56265 | chr2:178562899;178562898;178562897 | chr2:179427626;179427625;179427624 |
Novex-1 | 18805 | 56638;56639;56640 | chr2:178562899;178562898;178562897 | chr2:179427626;179427625;179427624 |
Novex-2 | 18872 | 56839;56840;56841 | chr2:178562899;178562898;178562897 | chr2:179427626;179427625;179427624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.028 | N | 0.172 | 0.092 | 0.0611884634855 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02737E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2759 | likely_benign | 0.2674 | benign | -1.326 | Destabilizing | 0.373 | N | 0.541 | neutral | None | None | None | None | N |
N/C | 0.2178 | likely_benign | 0.2133 | benign | -0.665 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
N/D | 0.2625 | likely_benign | 0.2587 | benign | -1.772 | Destabilizing | 0.684 | D | 0.5 | neutral | N | 0.412860341 | None | None | N |
N/E | 0.5201 | ambiguous | 0.5358 | ambiguous | -1.554 | Destabilizing | 0.742 | D | 0.484 | neutral | None | None | None | None | N |
N/F | 0.4998 | ambiguous | 0.5071 | ambiguous | -0.798 | Destabilizing | 0.953 | D | 0.641 | neutral | None | None | None | None | N |
N/G | 0.4486 | ambiguous | 0.4437 | ambiguous | -1.713 | Destabilizing | 0.373 | N | 0.487 | neutral | None | None | None | None | N |
N/H | 0.0902 | likely_benign | 0.0892 | benign | -1.143 | Destabilizing | 0.979 | D | 0.511 | neutral | N | 0.442316457 | None | None | N |
N/I | 0.1501 | likely_benign | 0.1522 | benign | -0.294 | Destabilizing | 0.521 | D | 0.571 | neutral | N | 0.362354163 | None | None | N |
N/K | 0.3938 | ambiguous | 0.403 | ambiguous | -0.409 | Destabilizing | 0.684 | D | 0.485 | neutral | N | 0.385884384 | None | None | N |
N/L | 0.1957 | likely_benign | 0.2005 | benign | -0.294 | Destabilizing | 0.373 | N | 0.531 | neutral | None | None | None | None | N |
N/M | 0.2976 | likely_benign | 0.2968 | benign | -0.102 | Destabilizing | 0.953 | D | 0.611 | neutral | None | None | None | None | N |
N/P | 0.9458 | likely_pathogenic | 0.9467 | pathogenic | -0.612 | Destabilizing | 0.953 | D | 0.6 | neutral | None | None | None | None | N |
N/Q | 0.3649 | ambiguous | 0.3634 | ambiguous | -1.026 | Destabilizing | 0.91 | D | 0.499 | neutral | None | None | None | None | N |
N/R | 0.3956 | ambiguous | 0.4041 | ambiguous | -0.502 | Destabilizing | 0.91 | D | 0.501 | neutral | None | None | None | None | N |
N/S | 0.0926 | likely_benign | 0.0897 | benign | -1.34 | Destabilizing | 0.028 | N | 0.172 | neutral | N | 0.383748156 | None | None | N |
N/T | 0.1146 | likely_benign | 0.1102 | benign | -0.937 | Destabilizing | 0.028 | N | 0.156 | neutral | N | 0.301705562 | None | None | N |
N/V | 0.1649 | likely_benign | 0.1654 | benign | -0.612 | Destabilizing | 0.016 | N | 0.424 | neutral | None | None | None | None | N |
N/W | 0.8115 | likely_pathogenic | 0.8134 | pathogenic | -0.614 | Destabilizing | 0.996 | D | 0.686 | prob.neutral | None | None | None | None | N |
N/Y | 0.1704 | likely_benign | 0.174 | benign | -0.32 | Destabilizing | 0.979 | D | 0.603 | neutral | N | 0.460035426 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.