Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27776 | 83551;83552;83553 | chr2:178562806;178562805;178562804 | chr2:179427533;179427532;179427531 |
N2AB | 26135 | 78628;78629;78630 | chr2:178562806;178562805;178562804 | chr2:179427533;179427532;179427531 |
N2A | 25208 | 75847;75848;75849 | chr2:178562806;178562805;178562804 | chr2:179427533;179427532;179427531 |
N2B | 18711 | 56356;56357;56358 | chr2:178562806;178562805;178562804 | chr2:179427533;179427532;179427531 |
Novex-1 | 18836 | 56731;56732;56733 | chr2:178562806;178562805;178562804 | chr2:179427533;179427532;179427531 |
Novex-2 | 18903 | 56932;56933;56934 | chr2:178562806;178562805;178562804 | chr2:179427533;179427532;179427531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs2154160964 | None | None | N | 0.142 | 0.064 | 0.0954503805726 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2579 | likely_benign | 0.272 | benign | -0.264 | Destabilizing | 0.055 | N | 0.359 | neutral | None | None | None | None | N |
R/C | 0.1442 | likely_benign | 0.1618 | benign | -0.224 | Destabilizing | 0.883 | D | 0.361 | neutral | None | None | None | None | N |
R/D | 0.5441 | ambiguous | 0.5712 | pathogenic | -0.062 | Destabilizing | 0.22 | N | 0.468 | neutral | None | None | None | None | N |
R/E | 0.2885 | likely_benign | 0.3054 | benign | -0.005 | Destabilizing | 0.055 | N | 0.423 | neutral | None | None | None | None | N |
R/F | 0.4736 | ambiguous | 0.5001 | ambiguous | -0.48 | Destabilizing | 0.667 | D | 0.402 | neutral | None | None | None | None | N |
R/G | 0.1671 | likely_benign | 0.178 | benign | -0.47 | Destabilizing | 0.042 | N | 0.429 | neutral | N | 0.425840786 | None | None | N |
R/H | 0.0898 | likely_benign | 0.0962 | benign | -0.859 | Destabilizing | 0.667 | D | 0.493 | neutral | None | None | None | None | N |
R/I | 0.2365 | likely_benign | 0.2444 | benign | 0.251 | Stabilizing | 0.272 | N | 0.415 | neutral | N | 0.421837689 | None | None | N |
R/K | 0.0719 | likely_benign | 0.0692 | benign | -0.233 | Destabilizing | None | N | 0.142 | neutral | N | 0.324444428 | None | None | N |
R/L | 0.2013 | likely_benign | 0.2182 | benign | 0.251 | Stabilizing | 0.124 | N | 0.456 | neutral | None | None | None | None | N |
R/M | 0.2103 | likely_benign | 0.2217 | benign | 0.029 | Stabilizing | 0.667 | D | 0.417 | neutral | None | None | None | None | N |
R/N | 0.405 | ambiguous | 0.42 | ambiguous | 0.207 | Stabilizing | 0.22 | N | 0.431 | neutral | None | None | None | None | N |
R/P | 0.7255 | likely_pathogenic | 0.7613 | pathogenic | 0.1 | Stabilizing | 0.364 | N | 0.45 | neutral | None | None | None | None | N |
R/Q | 0.0865 | likely_benign | 0.0927 | benign | -0.024 | Destabilizing | 0.124 | N | 0.444 | neutral | None | None | None | None | N |
R/S | 0.306 | likely_benign | 0.3299 | benign | -0.32 | Destabilizing | 0.003 | N | 0.221 | neutral | N | 0.347779861 | None | None | N |
R/T | 0.1377 | likely_benign | 0.1453 | benign | -0.128 | Destabilizing | 0.001 | N | 0.225 | neutral | N | 0.334101274 | None | None | N |
R/V | 0.2678 | likely_benign | 0.2733 | benign | 0.1 | Stabilizing | 0.124 | N | 0.466 | neutral | None | None | None | None | N |
R/W | 0.1775 | likely_benign | 0.1976 | benign | -0.401 | Destabilizing | 0.958 | D | 0.387 | neutral | None | None | None | None | N |
R/Y | 0.3343 | likely_benign | 0.3494 | ambiguous | -0.016 | Destabilizing | 0.667 | D | 0.417 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.