Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27777 | 83554;83555;83556 | chr2:178562803;178562802;178562801 | chr2:179427530;179427529;179427528 |
N2AB | 26136 | 78631;78632;78633 | chr2:178562803;178562802;178562801 | chr2:179427530;179427529;179427528 |
N2A | 25209 | 75850;75851;75852 | chr2:178562803;178562802;178562801 | chr2:179427530;179427529;179427528 |
N2B | 18712 | 56359;56360;56361 | chr2:178562803;178562802;178562801 | chr2:179427530;179427529;179427528 |
Novex-1 | 18837 | 56734;56735;56736 | chr2:178562803;178562802;178562801 | chr2:179427530;179427529;179427528 |
Novex-2 | 18904 | 56935;56936;56937 | chr2:178562803;178562802;178562801 | chr2:179427530;179427529;179427528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.367 | N | 0.387 | 0.295 | 0.338110398507 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85981E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2559 | likely_benign | 0.2765 | benign | -0.593 | Destabilizing | 0.367 | N | 0.387 | neutral | N | 0.469900754 | None | None | N |
E/C | 0.9 | likely_pathogenic | 0.9045 | pathogenic | -0.274 | Destabilizing | 0.984 | D | 0.551 | neutral | None | None | None | None | N |
E/D | 0.0816 | likely_benign | 0.0849 | benign | -0.576 | Destabilizing | None | N | 0.069 | neutral | N | 0.436364424 | None | None | N |
E/F | 0.8696 | likely_pathogenic | 0.8662 | pathogenic | -0.208 | Destabilizing | 0.969 | D | 0.515 | neutral | None | None | None | None | N |
E/G | 0.2952 | likely_benign | 0.32 | benign | -0.861 | Destabilizing | 0.491 | N | 0.432 | neutral | N | 0.477902925 | None | None | N |
E/H | 0.6417 | likely_pathogenic | 0.6529 | pathogenic | -0.157 | Destabilizing | 0.879 | D | 0.418 | neutral | None | None | None | None | N |
E/I | 0.6494 | likely_pathogenic | 0.6476 | pathogenic | 0.107 | Stabilizing | 0.826 | D | 0.528 | neutral | None | None | None | None | N |
E/K | 0.4616 | ambiguous | 0.4933 | ambiguous | -0.005 | Destabilizing | 0.518 | D | 0.427 | neutral | N | 0.484183575 | None | None | N |
E/L | 0.6631 | likely_pathogenic | 0.6763 | pathogenic | 0.107 | Stabilizing | 0.826 | D | 0.487 | neutral | None | None | None | None | N |
E/M | 0.6929 | likely_pathogenic | 0.7 | pathogenic | 0.259 | Stabilizing | 0.907 | D | 0.483 | neutral | None | None | None | None | N |
E/N | 0.2885 | likely_benign | 0.3173 | benign | -0.464 | Destabilizing | 0.001 | N | 0.17 | neutral | None | None | None | None | N |
E/P | 0.959 | likely_pathogenic | 0.9698 | pathogenic | -0.105 | Destabilizing | 0.682 | D | 0.444 | neutral | None | None | None | None | N |
E/Q | 0.2987 | likely_benign | 0.3106 | benign | -0.387 | Destabilizing | 0.434 | N | 0.433 | neutral | N | 0.471839765 | None | None | N |
E/R | 0.6177 | likely_pathogenic | 0.6415 | pathogenic | 0.269 | Stabilizing | 0.833 | D | 0.423 | neutral | None | None | None | None | N |
E/S | 0.2921 | likely_benign | 0.3075 | benign | -0.654 | Destabilizing | 0.278 | N | 0.387 | neutral | None | None | None | None | N |
E/T | 0.3773 | ambiguous | 0.3839 | ambiguous | -0.433 | Destabilizing | 0.515 | D | 0.418 | neutral | None | None | None | None | N |
E/V | 0.4316 | ambiguous | 0.4433 | ambiguous | -0.105 | Destabilizing | 0.717 | D | 0.476 | neutral | N | 0.478916883 | None | None | N |
E/W | 0.9485 | likely_pathogenic | 0.9501 | pathogenic | 0.03 | Stabilizing | 0.997 | D | 0.616 | neutral | None | None | None | None | N |
E/Y | 0.7507 | likely_pathogenic | 0.7555 | pathogenic | 0.046 | Stabilizing | 0.988 | D | 0.508 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.