Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27792 | 83599;83600;83601 | chr2:178562758;178562757;178562756 | chr2:179427485;179427484;179427483 |
N2AB | 26151 | 78676;78677;78678 | chr2:178562758;178562757;178562756 | chr2:179427485;179427484;179427483 |
N2A | 25224 | 75895;75896;75897 | chr2:178562758;178562757;178562756 | chr2:179427485;179427484;179427483 |
N2B | 18727 | 56404;56405;56406 | chr2:178562758;178562757;178562756 | chr2:179427485;179427484;179427483 |
Novex-1 | 18852 | 56779;56780;56781 | chr2:178562758;178562757;178562756 | chr2:179427485;179427484;179427483 |
Novex-2 | 18919 | 56980;56981;56982 | chr2:178562758;178562757;178562756 | chr2:179427485;179427484;179427483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs747559346 | -0.361 | 0.822 | N | 0.456 | 0.305 | 0.517709844387 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 8.9E-06 | 0 |
I/T | rs747559346 | -0.361 | 0.822 | N | 0.456 | 0.305 | 0.517709844387 | gnomAD-4.0.0 | 7.5308E-06 | None | None | None | None | I | None | 0 | 2.24024E-05 | None | 0 | 0 | None | 0 | 0 | 6.29845E-06 | 2.32094E-05 | 1.65848E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4162 | ambiguous | 0.4533 | ambiguous | -0.663 | Destabilizing | 0.86 | D | 0.471 | neutral | None | None | None | None | I |
I/C | 0.8272 | likely_pathogenic | 0.8417 | pathogenic | -0.668 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | I |
I/D | 0.8436 | likely_pathogenic | 0.8735 | pathogenic | 0.134 | Stabilizing | 0.019 | N | 0.388 | neutral | None | None | None | None | I |
I/E | 0.7765 | likely_pathogenic | 0.8144 | pathogenic | 0.052 | Stabilizing | 0.754 | D | 0.532 | neutral | None | None | None | None | I |
I/F | 0.2798 | likely_benign | 0.3068 | benign | -0.642 | Destabilizing | 0.99 | D | 0.422 | neutral | N | 0.459659785 | None | None | I |
I/G | 0.8112 | likely_pathogenic | 0.8411 | pathogenic | -0.832 | Destabilizing | 0.956 | D | 0.537 | neutral | None | None | None | None | I |
I/H | 0.6937 | likely_pathogenic | 0.7371 | pathogenic | -0.161 | Destabilizing | 0.998 | D | 0.63 | neutral | None | None | None | None | I |
I/K | 0.7236 | likely_pathogenic | 0.7747 | pathogenic | -0.263 | Destabilizing | 0.956 | D | 0.651 | neutral | None | None | None | None | I |
I/L | 0.0907 | likely_benign | 0.1005 | benign | -0.341 | Destabilizing | 0.795 | D | 0.317 | neutral | N | 0.451963021 | None | None | I |
I/M | 0.1221 | likely_benign | 0.1303 | benign | -0.371 | Destabilizing | 0.99 | D | 0.428 | neutral | N | 0.508395094 | None | None | I |
I/N | 0.3638 | ambiguous | 0.4001 | ambiguous | -0.084 | Destabilizing | 0.89 | D | 0.653 | neutral | N | 0.383372515 | None | None | I |
I/P | 0.9259 | likely_pathogenic | 0.9281 | pathogenic | -0.415 | Destabilizing | 0.978 | D | 0.663 | neutral | None | None | None | None | I |
I/Q | 0.6465 | likely_pathogenic | 0.6914 | pathogenic | -0.282 | Destabilizing | 0.978 | D | 0.664 | neutral | None | None | None | None | I |
I/R | 0.611 | likely_pathogenic | 0.6599 | pathogenic | 0.222 | Stabilizing | 0.978 | D | 0.664 | neutral | None | None | None | None | I |
I/S | 0.3946 | ambiguous | 0.4311 | ambiguous | -0.603 | Destabilizing | 0.822 | D | 0.483 | neutral | N | 0.447210562 | None | None | I |
I/T | 0.201 | likely_benign | 0.1918 | benign | -0.572 | Destabilizing | 0.822 | D | 0.456 | neutral | N | 0.465238963 | None | None | I |
I/V | 0.1251 | likely_benign | 0.1193 | benign | -0.415 | Destabilizing | 0.795 | D | 0.351 | neutral | N | 0.473223728 | None | None | I |
I/W | 0.832 | likely_pathogenic | 0.8513 | pathogenic | -0.647 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | I |
I/Y | 0.6683 | likely_pathogenic | 0.6974 | pathogenic | -0.389 | Destabilizing | 0.993 | D | 0.501 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.