Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27824 | 83695;83696;83697 | chr2:178562662;178562661;178562660 | chr2:179427389;179427388;179427387 |
N2AB | 26183 | 78772;78773;78774 | chr2:178562662;178562661;178562660 | chr2:179427389;179427388;179427387 |
N2A | 25256 | 75991;75992;75993 | chr2:178562662;178562661;178562660 | chr2:179427389;179427388;179427387 |
N2B | 18759 | 56500;56501;56502 | chr2:178562662;178562661;178562660 | chr2:179427389;179427388;179427387 |
Novex-1 | 18884 | 56875;56876;56877 | chr2:178562662;178562661;178562660 | chr2:179427389;179427388;179427387 |
Novex-2 | 18951 | 57076;57077;57078 | chr2:178562662;178562661;178562660 | chr2:179427389;179427388;179427387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.012 | N | 0.371 | 0.118 | 0.242825505644 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.07 | likely_benign | 0.0714 | benign | -0.954 | Destabilizing | 0.005 | N | 0.285 | neutral | N | 0.51775087 | None | None | N |
T/C | 0.2777 | likely_benign | 0.307 | benign | -0.483 | Destabilizing | 0.356 | N | 0.459 | neutral | None | None | None | None | N |
T/D | 0.4436 | ambiguous | 0.4593 | ambiguous | -0.141 | Destabilizing | 0.038 | N | 0.399 | neutral | None | None | None | None | N |
T/E | 0.4994 | ambiguous | 0.5087 | ambiguous | -0.061 | Destabilizing | 0.016 | N | 0.389 | neutral | None | None | None | None | N |
T/F | 0.1863 | likely_benign | 0.1806 | benign | -0.783 | Destabilizing | 0.214 | N | 0.548 | neutral | None | None | None | None | N |
T/G | 0.147 | likely_benign | 0.158 | benign | -1.29 | Destabilizing | 0.016 | N | 0.39 | neutral | None | None | None | None | N |
T/H | 0.2669 | likely_benign | 0.2611 | benign | -1.42 | Destabilizing | 0.214 | N | 0.499 | neutral | None | None | None | None | N |
T/I | 0.1452 | likely_benign | 0.1285 | benign | -0.122 | Destabilizing | 0.012 | N | 0.371 | neutral | N | 0.473347475 | None | None | N |
T/K | 0.4722 | ambiguous | 0.4579 | ambiguous | -0.542 | Destabilizing | 0.016 | N | 0.387 | neutral | None | None | None | None | N |
T/L | 0.1022 | likely_benign | 0.0935 | benign | -0.122 | Destabilizing | None | N | 0.241 | neutral | None | None | None | None | N |
T/M | 0.0968 | likely_benign | 0.0923 | benign | -0.012 | Destabilizing | 0.214 | N | 0.462 | neutral | None | None | None | None | N |
T/N | 0.1016 | likely_benign | 0.0997 | benign | -0.686 | Destabilizing | None | N | 0.166 | neutral | N | 0.464321817 | None | None | N |
T/P | 0.5129 | ambiguous | 0.5234 | ambiguous | -0.366 | Destabilizing | 0.055 | N | 0.487 | neutral | N | 0.477373173 | None | None | N |
T/Q | 0.3187 | likely_benign | 0.3167 | benign | -0.675 | Destabilizing | 0.072 | N | 0.525 | neutral | None | None | None | None | N |
T/R | 0.4148 | ambiguous | 0.404 | ambiguous | -0.489 | Destabilizing | 0.072 | N | 0.48 | neutral | None | None | None | None | N |
T/S | 0.0665 | likely_benign | 0.0683 | benign | -1.037 | Destabilizing | None | N | 0.163 | neutral | N | 0.396477885 | None | None | N |
T/V | 0.1108 | likely_benign | 0.0983 | benign | -0.366 | Destabilizing | None | N | 0.17 | neutral | None | None | None | None | N |
T/W | 0.5903 | likely_pathogenic | 0.6012 | pathogenic | -0.759 | Destabilizing | 0.864 | D | 0.53 | neutral | None | None | None | None | N |
T/Y | 0.2416 | likely_benign | 0.242 | benign | -0.492 | Destabilizing | 0.356 | N | 0.52 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.