Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27828 | 83707;83708;83709 | chr2:178562650;178562649;178562648 | chr2:179427377;179427376;179427375 |
N2AB | 26187 | 78784;78785;78786 | chr2:178562650;178562649;178562648 | chr2:179427377;179427376;179427375 |
N2A | 25260 | 76003;76004;76005 | chr2:178562650;178562649;178562648 | chr2:179427377;179427376;179427375 |
N2B | 18763 | 56512;56513;56514 | chr2:178562650;178562649;178562648 | chr2:179427377;179427376;179427375 |
Novex-1 | 18888 | 56887;56888;56889 | chr2:178562650;178562649;178562648 | chr2:179427377;179427376;179427375 |
Novex-2 | 18955 | 57088;57089;57090 | chr2:178562650;178562649;178562648 | chr2:179427377;179427376;179427375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1234125693 | -0.477 | 0.005 | N | 0.124 | 0.1 | 0.203808441222 | gnomAD-2.1.1 | 4.25E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.75E-05 | None | 0 | 0 | 0 |
E/D | rs1234125693 | -0.477 | 0.005 | N | 0.124 | 0.1 | 0.203808441222 | gnomAD-4.0.0 | 1.625E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.5063E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.147 | likely_benign | 0.1386 | benign | -0.697 | Destabilizing | 0.454 | N | 0.419 | neutral | N | 0.477000326 | None | None | N |
E/C | 0.7148 | likely_pathogenic | 0.6972 | pathogenic | -0.224 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | N |
E/D | 0.0707 | likely_benign | 0.0665 | benign | -0.663 | Destabilizing | 0.005 | N | 0.124 | neutral | N | 0.391440211 | None | None | N |
E/F | 0.7159 | likely_pathogenic | 0.7054 | pathogenic | -0.373 | Destabilizing | 0.974 | D | 0.576 | neutral | None | None | None | None | N |
E/G | 0.1177 | likely_benign | 0.1154 | benign | -0.958 | Destabilizing | 0.625 | D | 0.459 | neutral | N | 0.460108076 | None | None | N |
E/H | 0.4051 | ambiguous | 0.409 | ambiguous | -0.331 | Destabilizing | 0.991 | D | 0.453 | neutral | None | None | None | None | N |
E/I | 0.3751 | ambiguous | 0.3484 | ambiguous | -0.018 | Destabilizing | 0.949 | D | 0.569 | neutral | None | None | None | None | N |
E/K | 0.1927 | likely_benign | 0.2023 | benign | -0.006 | Destabilizing | 0.801 | D | 0.363 | neutral | N | 0.44902429 | None | None | N |
E/L | 0.3873 | ambiguous | 0.3664 | ambiguous | -0.018 | Destabilizing | 0.728 | D | 0.546 | neutral | None | None | None | None | N |
E/M | 0.4622 | ambiguous | 0.4507 | ambiguous | 0.252 | Stabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
E/N | 0.1609 | likely_benign | 0.1553 | benign | -0.456 | Destabilizing | 0.728 | D | 0.343 | neutral | None | None | None | None | N |
E/P | 0.3133 | likely_benign | 0.2943 | benign | -0.224 | Destabilizing | 0.974 | D | 0.538 | neutral | None | None | None | None | N |
E/Q | 0.1493 | likely_benign | 0.1547 | benign | -0.391 | Destabilizing | 0.891 | D | 0.426 | neutral | N | 0.460953438 | None | None | N |
E/R | 0.3047 | likely_benign | 0.3172 | benign | 0.246 | Stabilizing | 0.974 | D | 0.443 | neutral | None | None | None | None | N |
E/S | 0.1386 | likely_benign | 0.1313 | benign | -0.641 | Destabilizing | 0.08 | N | 0.125 | neutral | None | None | None | None | N |
E/T | 0.1669 | likely_benign | 0.1543 | benign | -0.423 | Destabilizing | 0.067 | N | 0.253 | neutral | None | None | None | None | N |
E/V | 0.2404 | likely_benign | 0.2248 | benign | -0.224 | Destabilizing | 0.669 | D | 0.531 | neutral | N | 0.481040708 | None | None | N |
E/W | 0.8602 | likely_pathogenic | 0.8616 | pathogenic | -0.126 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
E/Y | 0.5593 | ambiguous | 0.5578 | ambiguous | -0.113 | Destabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.