Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27837 | 83734;83735;83736 | chr2:178562623;178562622;178562621 | chr2:179427350;179427349;179427348 |
N2AB | 26196 | 78811;78812;78813 | chr2:178562623;178562622;178562621 | chr2:179427350;179427349;179427348 |
N2A | 25269 | 76030;76031;76032 | chr2:178562623;178562622;178562621 | chr2:179427350;179427349;179427348 |
N2B | 18772 | 56539;56540;56541 | chr2:178562623;178562622;178562621 | chr2:179427350;179427349;179427348 |
Novex-1 | 18897 | 56914;56915;56916 | chr2:178562623;178562622;178562621 | chr2:179427350;179427349;179427348 |
Novex-2 | 18964 | 57115;57116;57117 | chr2:178562623;178562622;178562621 | chr2:179427350;179427349;179427348 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1324677540 | -1.237 | 0.992 | N | 0.709 | 0.333 | 0.735914652579 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
Y/C | rs1324677540 | -1.237 | 0.992 | N | 0.709 | 0.333 | 0.735914652579 | gnomAD-4.0.0 | 1.60393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87135E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6038 | likely_pathogenic | 0.5465 | ambiguous | -2.91 | Highly Destabilizing | 0.668 | D | 0.618 | neutral | None | None | None | None | N |
Y/C | 0.1573 | likely_benign | 0.1466 | benign | -1.344 | Destabilizing | 0.992 | D | 0.709 | prob.delet. | N | 0.478027829 | None | None | N |
Y/D | 0.6935 | likely_pathogenic | 0.6712 | pathogenic | -2.471 | Highly Destabilizing | 0.915 | D | 0.731 | prob.delet. | D | 0.5225779 | None | None | N |
Y/E | 0.8793 | likely_pathogenic | 0.8571 | pathogenic | -2.293 | Highly Destabilizing | 0.876 | D | 0.652 | neutral | None | None | None | None | N |
Y/F | 0.083 | likely_benign | 0.0738 | benign | -1.058 | Destabilizing | 0.001 | N | 0.473 | neutral | N | 0.456219622 | None | None | N |
Y/G | 0.6261 | likely_pathogenic | 0.5909 | pathogenic | -3.284 | Highly Destabilizing | 0.935 | D | 0.688 | prob.neutral | None | None | None | None | N |
Y/H | 0.2227 | likely_benign | 0.1979 | benign | -1.717 | Destabilizing | 0.003 | N | 0.475 | neutral | N | 0.505434934 | None | None | N |
Y/I | 0.487 | ambiguous | 0.4124 | ambiguous | -1.683 | Destabilizing | 0.121 | N | 0.623 | neutral | None | None | None | None | N |
Y/K | 0.7971 | likely_pathogenic | 0.7553 | pathogenic | -1.544 | Destabilizing | 0.461 | N | 0.695 | prob.neutral | None | None | None | None | N |
Y/L | 0.4238 | ambiguous | 0.3858 | ambiguous | -1.683 | Destabilizing | 0.038 | N | 0.571 | neutral | None | None | None | None | N |
Y/M | 0.6595 | likely_pathogenic | 0.5757 | pathogenic | -1.386 | Destabilizing | 0.942 | D | 0.657 | neutral | None | None | None | None | N |
Y/N | 0.3622 | ambiguous | 0.3088 | benign | -2.083 | Highly Destabilizing | 0.842 | D | 0.701 | prob.neutral | N | 0.502258556 | None | None | N |
Y/P | 0.9827 | likely_pathogenic | 0.9843 | pathogenic | -2.103 | Highly Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
Y/Q | 0.6506 | likely_pathogenic | 0.6017 | pathogenic | -1.942 | Destabilizing | 0.812 | D | 0.668 | neutral | None | None | None | None | N |
Y/R | 0.5872 | likely_pathogenic | 0.5693 | pathogenic | -1.225 | Destabilizing | 0.746 | D | 0.697 | prob.neutral | None | None | None | None | N |
Y/S | 0.2913 | likely_benign | 0.2693 | benign | -2.573 | Highly Destabilizing | 0.915 | D | 0.653 | neutral | N | 0.495889944 | None | None | N |
Y/T | 0.5226 | ambiguous | 0.4493 | ambiguous | -2.29 | Highly Destabilizing | 0.935 | D | 0.689 | prob.neutral | None | None | None | None | N |
Y/V | 0.3977 | ambiguous | 0.3361 | benign | -2.103 | Highly Destabilizing | 0.502 | D | 0.595 | neutral | None | None | None | None | N |
Y/W | 0.4779 | ambiguous | 0.4914 | ambiguous | -0.317 | Destabilizing | 0.968 | D | 0.642 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.