Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27845 | 83758;83759;83760 | chr2:178562599;178562598;178562597 | chr2:179427326;179427325;179427324 |
N2AB | 26204 | 78835;78836;78837 | chr2:178562599;178562598;178562597 | chr2:179427326;179427325;179427324 |
N2A | 25277 | 76054;76055;76056 | chr2:178562599;178562598;178562597 | chr2:179427326;179427325;179427324 |
N2B | 18780 | 56563;56564;56565 | chr2:178562599;178562598;178562597 | chr2:179427326;179427325;179427324 |
Novex-1 | 18905 | 56938;56939;56940 | chr2:178562599;178562598;178562597 | chr2:179427326;179427325;179427324 |
Novex-2 | 18972 | 57139;57140;57141 | chr2:178562599;178562598;178562597 | chr2:179427326;179427325;179427324 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs751068189 | 0.566 | 0.02 | N | 0.38 | 0.3 | 0.206339911435 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
E/K | rs751068189 | 0.566 | 0.02 | N | 0.38 | 0.3 | 0.206339911435 | gnomAD-4.0.0 | 1.59911E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86638E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3592 | ambiguous | 0.3863 | ambiguous | -0.455 | Destabilizing | 0.635 | D | 0.541 | neutral | N | 0.487310533 | None | None | I |
E/C | 0.9622 | likely_pathogenic | 0.9624 | pathogenic | -0.201 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | None | None | None | None | I |
E/D | 0.3203 | likely_benign | 0.279 | benign | -0.414 | Destabilizing | 0.31 | N | 0.339 | neutral | N | 0.507128445 | None | None | I |
E/F | 0.9651 | likely_pathogenic | 0.9678 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
E/G | 0.6171 | likely_pathogenic | 0.615 | pathogenic | -0.656 | Destabilizing | 0.976 | D | 0.507 | neutral | N | 0.516262429 | None | None | I |
E/H | 0.8669 | likely_pathogenic | 0.872 | pathogenic | 0.198 | Stabilizing | 0.994 | D | 0.608 | neutral | None | None | None | None | I |
E/I | 0.5626 | ambiguous | 0.5777 | pathogenic | 0.046 | Stabilizing | 0.966 | D | 0.651 | neutral | None | None | None | None | I |
E/K | 0.447 | ambiguous | 0.474 | ambiguous | 0.311 | Stabilizing | 0.02 | N | 0.38 | neutral | N | 0.50614701 | None | None | I |
E/L | 0.7769 | likely_pathogenic | 0.7923 | pathogenic | 0.046 | Stabilizing | 0.933 | D | 0.607 | neutral | None | None | None | None | I |
E/M | 0.762 | likely_pathogenic | 0.7754 | pathogenic | 0.064 | Stabilizing | 0.983 | D | 0.637 | neutral | None | None | None | None | I |
E/N | 0.6339 | likely_pathogenic | 0.6264 | pathogenic | -0.155 | Destabilizing | 0.867 | D | 0.604 | neutral | None | None | None | None | I |
E/P | 0.8488 | likely_pathogenic | 0.8273 | pathogenic | -0.102 | Destabilizing | 0.809 | D | 0.615 | neutral | None | None | None | None | I |
E/Q | 0.3175 | likely_benign | 0.3493 | ambiguous | -0.101 | Destabilizing | 0.822 | D | 0.478 | neutral | N | 0.469545132 | None | None | I |
E/R | 0.6517 | likely_pathogenic | 0.6753 | pathogenic | 0.615 | Stabilizing | 0.937 | D | 0.579 | neutral | None | None | None | None | I |
E/S | 0.5287 | ambiguous | 0.5335 | ambiguous | -0.293 | Destabilizing | 0.822 | D | 0.527 | neutral | None | None | None | None | I |
E/T | 0.5099 | ambiguous | 0.5257 | ambiguous | -0.116 | Destabilizing | 0.957 | D | 0.569 | neutral | None | None | None | None | I |
E/V | 0.4418 | ambiguous | 0.4638 | ambiguous | -0.102 | Destabilizing | 0.882 | D | 0.601 | neutral | N | 0.473014626 | None | None | I |
E/W | 0.9936 | likely_pathogenic | 0.9938 | pathogenic | 0.011 | Stabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | I |
E/Y | 0.9315 | likely_pathogenic | 0.9324 | pathogenic | 0.064 | Stabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.