Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27931 | 84016;84017;84018 | chr2:178562341;178562340;178562339 | chr2:179427068;179427067;179427066 |
N2AB | 26290 | 79093;79094;79095 | chr2:178562341;178562340;178562339 | chr2:179427068;179427067;179427066 |
N2A | 25363 | 76312;76313;76314 | chr2:178562341;178562340;178562339 | chr2:179427068;179427067;179427066 |
N2B | 18866 | 56821;56822;56823 | chr2:178562341;178562340;178562339 | chr2:179427068;179427067;179427066 |
Novex-1 | 18991 | 57196;57197;57198 | chr2:178562341;178562340;178562339 | chr2:179427068;179427067;179427066 |
Novex-2 | 19058 | 57397;57398;57399 | chr2:178562341;178562340;178562339 | chr2:179427068;179427067;179427066 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.972 | N | 0.617 | 0.358 | 0.365317461125 | gnomAD-4.0.0 | 1.02782E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35009E-05 | 0 | 0 |
E/D | rs767740501 | -1.058 | 0.815 | N | 0.446 | 0.157 | 0.294206760003 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.73E-05 | 0 | 0 |
E/K | rs752902445 | -0.639 | 0.969 | N | 0.512 | 0.293 | 0.279776271856 | gnomAD-2.1.1 | 1.81E-05 | None | None | None | None | N | None | 0 | 5.72E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.36E-05 | 0 |
E/K | rs752902445 | -0.639 | 0.969 | N | 0.512 | 0.293 | 0.279776271856 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs752902445 | -0.639 | 0.969 | N | 0.512 | 0.293 | 0.279776271856 | gnomAD-4.0.0 | 1.79975E-05 | None | None | None | None | N | None | 0 | 6.69703E-05 | None | 0 | 0 | None | 0 | 0 | 2.1205E-05 | 0 | 0 |
E/V | None | None | 0.987 | N | 0.787 | 0.391 | 0.458101713262 | gnomAD-4.0.0 | 6.85213E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00061E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2439 | likely_benign | 0.2645 | benign | -0.811 | Destabilizing | 0.972 | D | 0.617 | neutral | N | 0.475865463 | None | None | N |
E/C | 0.9498 | likely_pathogenic | 0.9519 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/D | 0.3392 | likely_benign | 0.4081 | ambiguous | -1.088 | Destabilizing | 0.815 | D | 0.446 | neutral | N | 0.50868867 | None | None | N |
E/F | 0.935 | likely_pathogenic | 0.9455 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
E/G | 0.4264 | ambiguous | 0.4498 | ambiguous | -1.219 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | N | 0.481398871 | None | None | N |
E/H | 0.8366 | likely_pathogenic | 0.851 | pathogenic | -0.379 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/I | 0.5538 | ambiguous | 0.5945 | pathogenic | 0.317 | Stabilizing | 0.996 | D | 0.79 | deleterious | None | None | None | None | N |
E/K | 0.4798 | ambiguous | 0.4849 | ambiguous | -0.809 | Destabilizing | 0.969 | D | 0.512 | neutral | N | 0.507917878 | None | None | N |
E/L | 0.6851 | likely_pathogenic | 0.7107 | pathogenic | 0.317 | Stabilizing | 0.993 | D | 0.786 | deleterious | None | None | None | None | N |
E/M | 0.6299 | likely_pathogenic | 0.666 | pathogenic | 0.747 | Stabilizing | 0.995 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.5067 | ambiguous | 0.5828 | pathogenic | -1.313 | Destabilizing | 0.985 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/P | 0.7513 | likely_pathogenic | 0.7618 | pathogenic | -0.038 | Destabilizing | 0.977 | D | 0.804 | deleterious | None | None | None | None | N |
E/Q | 0.3009 | likely_benign | 0.2955 | benign | -1.116 | Destabilizing | 0.585 | D | 0.255 | neutral | N | 0.506187082 | None | None | N |
E/R | 0.6818 | likely_pathogenic | 0.6814 | pathogenic | -0.509 | Destabilizing | 0.993 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/S | 0.3795 | ambiguous | 0.4295 | ambiguous | -1.676 | Destabilizing | 0.978 | D | 0.595 | neutral | None | None | None | None | N |
E/T | 0.3263 | likely_benign | 0.372 | ambiguous | -1.333 | Destabilizing | 0.995 | D | 0.768 | deleterious | None | None | None | None | N |
E/V | 0.3479 | ambiguous | 0.3766 | ambiguous | -0.038 | Destabilizing | 0.987 | D | 0.787 | deleterious | N | 0.514577279 | None | None | N |
E/W | 0.9829 | likely_pathogenic | 0.9841 | pathogenic | 0.211 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/Y | 0.8756 | likely_pathogenic | 0.8932 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.