Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27941 | 84046;84047;84048 | chr2:178562311;178562310;178562309 | chr2:179427038;179427037;179427036 |
N2AB | 26300 | 79123;79124;79125 | chr2:178562311;178562310;178562309 | chr2:179427038;179427037;179427036 |
N2A | 25373 | 76342;76343;76344 | chr2:178562311;178562310;178562309 | chr2:179427038;179427037;179427036 |
N2B | 18876 | 56851;56852;56853 | chr2:178562311;178562310;178562309 | chr2:179427038;179427037;179427036 |
Novex-1 | 19001 | 57226;57227;57228 | chr2:178562311;178562310;178562309 | chr2:179427038;179427037;179427036 |
Novex-2 | 19068 | 57427;57428;57429 | chr2:178562311;178562310;178562309 | chr2:179427038;179427037;179427036 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs545954394 | 0.878 | 0.992 | N | 0.466 | 0.355 | 0.36453787251 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 3.57E-05 | 0 |
E/K | rs545954394 | 0.878 | 0.992 | N | 0.466 | 0.355 | 0.36453787251 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 2.41E-05 | 1.96567E-04 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs545954394 | 0.878 | 0.992 | N | 0.466 | 0.355 | 0.36453787251 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs545954394 | 0.878 | 0.992 | N | 0.466 | 0.355 | 0.36453787251 | gnomAD-4.0.0 | 3.78119E-05 | None | None | None | None | N | None | 1.33301E-05 | 8.33973E-05 | None | 0 | 0 | None | 0 | 0 | 4.15389E-05 | 0 | 9.60676E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.303 | likely_benign | 0.4316 | ambiguous | -0.11 | Destabilizing | 0.958 | D | 0.515 | neutral | N | 0.475997461 | None | None | N |
E/C | 0.9365 | likely_pathogenic | 0.9689 | pathogenic | 0.105 | Stabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/D | 0.1452 | likely_benign | 0.1951 | benign | -0.211 | Destabilizing | 0.002 | N | 0.233 | neutral | N | 0.448408215 | None | None | N |
E/F | 0.9271 | likely_pathogenic | 0.9645 | pathogenic | -0.17 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
E/G | 0.2879 | likely_benign | 0.4018 | ambiguous | -0.246 | Destabilizing | 0.974 | D | 0.531 | neutral | N | 0.479629625 | None | None | N |
E/H | 0.735 | likely_pathogenic | 0.8269 | pathogenic | 0.213 | Stabilizing | 0.998 | D | 0.409 | neutral | None | None | None | None | N |
E/I | 0.5782 | likely_pathogenic | 0.7455 | pathogenic | 0.193 | Stabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
E/K | 0.3667 | ambiguous | 0.4785 | ambiguous | 0.591 | Stabilizing | 0.992 | D | 0.466 | neutral | N | 0.488638684 | None | None | N |
E/L | 0.6408 | likely_pathogenic | 0.7894 | pathogenic | 0.193 | Stabilizing | 0.989 | D | 0.591 | neutral | None | None | None | None | N |
E/M | 0.7038 | likely_pathogenic | 0.8257 | pathogenic | 0.184 | Stabilizing | 0.995 | D | 0.597 | neutral | None | None | None | None | N |
E/N | 0.4457 | ambiguous | 0.6015 | pathogenic | 0.354 | Stabilizing | 0.857 | D | 0.433 | neutral | None | None | None | None | N |
E/P | 0.8317 | likely_pathogenic | 0.8785 | pathogenic | 0.111 | Stabilizing | 0.976 | D | 0.483 | neutral | None | None | None | None | N |
E/Q | 0.2534 | likely_benign | 0.3349 | benign | 0.362 | Stabilizing | 0.987 | D | 0.401 | neutral | N | 0.517537439 | None | None | N |
E/R | 0.5439 | ambiguous | 0.6604 | pathogenic | 0.71 | Stabilizing | 0.995 | D | 0.428 | neutral | None | None | None | None | N |
E/S | 0.3342 | likely_benign | 0.4687 | ambiguous | 0.215 | Stabilizing | 0.937 | D | 0.452 | neutral | None | None | None | None | N |
E/T | 0.4343 | ambiguous | 0.5858 | pathogenic | 0.331 | Stabilizing | 0.976 | D | 0.473 | neutral | None | None | None | None | N |
E/V | 0.3996 | ambiguous | 0.5627 | ambiguous | 0.111 | Stabilizing | 0.993 | D | 0.521 | neutral | N | 0.516806721 | None | None | N |
E/W | 0.9733 | likely_pathogenic | 0.986 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Y | 0.8567 | likely_pathogenic | 0.9241 | pathogenic | 0.064 | Stabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.