Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27950 | 84073;84074;84075 | chr2:178562284;178562283;178562282 | chr2:179427011;179427010;179427009 |
N2AB | 26309 | 79150;79151;79152 | chr2:178562284;178562283;178562282 | chr2:179427011;179427010;179427009 |
N2A | 25382 | 76369;76370;76371 | chr2:178562284;178562283;178562282 | chr2:179427011;179427010;179427009 |
N2B | 18885 | 56878;56879;56880 | chr2:178562284;178562283;178562282 | chr2:179427011;179427010;179427009 |
Novex-1 | 19010 | 57253;57254;57255 | chr2:178562284;178562283;178562282 | chr2:179427011;179427010;179427009 |
Novex-2 | 19077 | 57454;57455;57456 | chr2:178562284;178562283;178562282 | chr2:179427011;179427010;179427009 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.998 | N | 0.815 | 0.221 | 0.370424759081 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
L/I | None | None | 0.811 | N | 0.663 | 0.077 | 0.237489013734 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43382E-05 | 0 |
L/P | None | None | 0.999 | N | 0.849 | 0.423 | 0.667319264289 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6088 | likely_pathogenic | 0.6779 | pathogenic | -2.196 | Highly Destabilizing | 0.99 | D | 0.703 | prob.delet. | None | None | None | None | N |
L/C | 0.8565 | likely_pathogenic | 0.8708 | pathogenic | -1.444 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/D | 0.9905 | likely_pathogenic | 0.9912 | pathogenic | -2.263 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
L/E | 0.9601 | likely_pathogenic | 0.9648 | pathogenic | -2.104 | Highly Destabilizing | 0.998 | D | 0.836 | deleterious | None | None | None | None | N |
L/F | 0.7014 | likely_pathogenic | 0.7365 | pathogenic | -1.273 | Destabilizing | 0.998 | D | 0.815 | deleterious | N | 0.489456132 | None | None | N |
L/G | 0.9232 | likely_pathogenic | 0.9342 | pathogenic | -2.683 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9448 | likely_pathogenic | 0.9506 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | N | 0.49498954 | None | None | N |
L/I | 0.2209 | likely_benign | 0.2604 | benign | -0.833 | Destabilizing | 0.811 | D | 0.663 | prob.neutral | N | 0.468279268 | None | None | N |
L/K | 0.9606 | likely_pathogenic | 0.9627 | pathogenic | -1.785 | Destabilizing | 0.952 | D | 0.831 | deleterious | None | None | None | None | N |
L/M | 0.2735 | likely_benign | 0.3109 | benign | -0.705 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
L/N | 0.9501 | likely_pathogenic | 0.9585 | pathogenic | -1.936 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
L/P | 0.85 | likely_pathogenic | 0.8851 | pathogenic | -1.263 | Destabilizing | 0.999 | D | 0.849 | deleterious | N | 0.428643444 | None | None | N |
L/Q | 0.8997 | likely_pathogenic | 0.9152 | pathogenic | -1.896 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
L/R | 0.929 | likely_pathogenic | 0.9353 | pathogenic | -1.378 | Destabilizing | 0.995 | D | 0.847 | deleterious | N | 0.485835281 | None | None | N |
L/S | 0.8626 | likely_pathogenic | 0.8919 | pathogenic | -2.597 | Highly Destabilizing | 0.997 | D | 0.772 | deleterious | None | None | None | None | N |
L/T | 0.4803 | ambiguous | 0.5485 | ambiguous | -2.303 | Highly Destabilizing | 0.296 | N | 0.485 | neutral | None | None | None | None | N |
L/V | 0.25 | likely_benign | 0.2949 | benign | -1.263 | Destabilizing | 0.739 | D | 0.705 | prob.delet. | N | 0.493444284 | None | None | N |
L/W | 0.8806 | likely_pathogenic | 0.8837 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/Y | 0.9405 | likely_pathogenic | 0.9437 | pathogenic | -1.31 | Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.