Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27954 | 84085;84086;84087 | chr2:178562272;178562271;178562270 | chr2:179426999;179426998;179426997 |
N2AB | 26313 | 79162;79163;79164 | chr2:178562272;178562271;178562270 | chr2:179426999;179426998;179426997 |
N2A | 25386 | 76381;76382;76383 | chr2:178562272;178562271;178562270 | chr2:179426999;179426998;179426997 |
N2B | 18889 | 56890;56891;56892 | chr2:178562272;178562271;178562270 | chr2:179426999;179426998;179426997 |
Novex-1 | 19014 | 57265;57266;57267 | chr2:178562272;178562271;178562270 | chr2:179426999;179426998;179426997 |
Novex-2 | 19081 | 57466;57467;57468 | chr2:178562272;178562271;178562270 | chr2:179426999;179426998;179426997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.984 | D | 0.582 | 0.221 | 0.707817649444 | gnomAD-4.0.0 | 6.84384E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99569E-07 | 0 | 0 |
V/L | rs1703951174 | None | 0.984 | N | 0.631 | 0.322 | 0.647688206944 | gnomAD-4.0.0 | 6.84384E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99569E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6937 | likely_pathogenic | 0.7483 | pathogenic | -1.698 | Destabilizing | 0.999 | D | 0.639 | neutral | D | 0.547385381 | None | None | N |
V/C | 0.9434 | likely_pathogenic | 0.9512 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.994 | likely_pathogenic | 0.9957 | pathogenic | -2.589 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/E | 0.9745 | likely_pathogenic | 0.9802 | pathogenic | -2.315 | Highly Destabilizing | 0.999 | D | 0.886 | deleterious | D | 0.547385381 | None | None | N |
V/F | 0.6474 | likely_pathogenic | 0.7071 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/G | 0.8861 | likely_pathogenic | 0.9165 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.548906318 | None | None | N |
V/H | 0.9896 | likely_pathogenic | 0.9918 | pathogenic | -2.039 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/I | 0.1023 | likely_benign | 0.1044 | benign | -0.194 | Destabilizing | 0.984 | D | 0.582 | neutral | D | 0.527514865 | None | None | N |
V/K | 0.9811 | likely_pathogenic | 0.9851 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/L | 0.5829 | likely_pathogenic | 0.6043 | pathogenic | -0.194 | Destabilizing | 0.984 | D | 0.631 | neutral | N | 0.504326789 | None | None | N |
V/M | 0.5033 | ambiguous | 0.5365 | ambiguous | -0.217 | Destabilizing | 1.0 | D | 0.659 | prob.neutral | None | None | None | None | N |
V/N | 0.9752 | likely_pathogenic | 0.9817 | pathogenic | -1.998 | Destabilizing | 0.998 | D | 0.91 | deleterious | None | None | None | None | N |
V/P | 0.9913 | likely_pathogenic | 0.9927 | pathogenic | -0.674 | Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
V/Q | 0.9636 | likely_pathogenic | 0.971 | pathogenic | -1.721 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
V/R | 0.9685 | likely_pathogenic | 0.9755 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
V/S | 0.9024 | likely_pathogenic | 0.926 | pathogenic | -2.487 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/T | 0.7603 | likely_pathogenic | 0.782 | pathogenic | -2.059 | Highly Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
V/W | 0.9935 | likely_pathogenic | 0.9952 | pathogenic | -1.59 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/Y | 0.9626 | likely_pathogenic | 0.9712 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.