Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27975 | 84148;84149;84150 | chr2:178562209;178562208;178562207 | chr2:179426936;179426935;179426934 |
N2AB | 26334 | 79225;79226;79227 | chr2:178562209;178562208;178562207 | chr2:179426936;179426935;179426934 |
N2A | 25407 | 76444;76445;76446 | chr2:178562209;178562208;178562207 | chr2:179426936;179426935;179426934 |
N2B | 18910 | 56953;56954;56955 | chr2:178562209;178562208;178562207 | chr2:179426936;179426935;179426934 |
Novex-1 | 19035 | 57328;57329;57330 | chr2:178562209;178562208;178562207 | chr2:179426936;179426935;179426934 |
Novex-2 | 19102 | 57529;57530;57531 | chr2:178562209;178562208;178562207 | chr2:179426936;179426935;179426934 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.942 | N | 0.529 | 0.328 | 0.293502639404 | gnomAD-4.0.0 | 6.8473E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99777E-07 | 0 | 0 |
K/R | None | None | 0.698 | N | 0.566 | 0.176 | 0.264081493735 | gnomAD-4.0.0 | 1.5944E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86174E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5984 | likely_pathogenic | 0.5251 | ambiguous | -0.123 | Destabilizing | 0.754 | D | 0.594 | neutral | None | None | None | None | N |
K/C | 0.8604 | likely_pathogenic | 0.7981 | pathogenic | -0.36 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/D | 0.8899 | likely_pathogenic | 0.863 | pathogenic | -0.025 | Destabilizing | 0.956 | D | 0.564 | neutral | None | None | None | None | N |
K/E | 0.4349 | ambiguous | 0.3919 | ambiguous | 0.026 | Stabilizing | 0.698 | D | 0.581 | neutral | N | 0.485794915 | None | None | N |
K/F | 0.8924 | likely_pathogenic | 0.8432 | pathogenic | -0.063 | Destabilizing | 0.993 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/G | 0.774 | likely_pathogenic | 0.7186 | pathogenic | -0.396 | Destabilizing | 0.019 | N | 0.453 | neutral | None | None | None | None | N |
K/H | 0.5173 | ambiguous | 0.4376 | ambiguous | -0.622 | Destabilizing | 0.994 | D | 0.585 | neutral | None | None | None | None | N |
K/I | 0.5478 | ambiguous | 0.4746 | ambiguous | 0.539 | Stabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/L | 0.4933 | ambiguous | 0.4043 | ambiguous | 0.539 | Stabilizing | 0.956 | D | 0.591 | neutral | None | None | None | None | N |
K/M | 0.386 | ambiguous | 0.341 | ambiguous | 0.19 | Stabilizing | 0.997 | D | 0.586 | neutral | N | 0.485189485 | None | None | N |
K/N | 0.7612 | likely_pathogenic | 0.7135 | pathogenic | -0.125 | Destabilizing | 0.942 | D | 0.529 | neutral | N | 0.486555384 | None | None | N |
K/P | 0.7024 | likely_pathogenic | 0.6211 | pathogenic | 0.348 | Stabilizing | 0.978 | D | 0.598 | neutral | None | None | None | None | N |
K/Q | 0.2294 | likely_benign | 0.1978 | benign | -0.218 | Destabilizing | 0.125 | N | 0.295 | neutral | N | 0.466757194 | None | None | N |
K/R | 0.0939 | likely_benign | 0.0858 | benign | -0.303 | Destabilizing | 0.698 | D | 0.566 | neutral | N | 0.463871605 | None | None | N |
K/S | 0.7663 | likely_pathogenic | 0.7079 | pathogenic | -0.619 | Destabilizing | 0.86 | D | 0.578 | neutral | None | None | None | None | N |
K/T | 0.4084 | ambiguous | 0.3715 | ambiguous | -0.397 | Destabilizing | 0.942 | D | 0.547 | neutral | D | 0.523477269 | None | None | N |
K/V | 0.5127 | ambiguous | 0.4405 | ambiguous | 0.348 | Stabilizing | 0.978 | D | 0.624 | neutral | None | None | None | None | N |
K/W | 0.8951 | likely_pathogenic | 0.848 | pathogenic | -0.053 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/Y | 0.8206 | likely_pathogenic | 0.7626 | pathogenic | 0.259 | Stabilizing | 0.993 | D | 0.668 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.