Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2799 | 8620;8621;8622 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
N2AB | 2799 | 8620;8621;8622 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
N2A | 2799 | 8620;8621;8622 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
N2B | 2753 | 8482;8483;8484 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
Novex-1 | 2753 | 8482;8483;8484 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
Novex-2 | 2753 | 8482;8483;8484 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
Novex-3 | 2799 | 8620;8621;8622 | chr2:178770306;178770305;178770304 | chr2:179635033;179635032;179635031 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.013 | D | 0.445 | 0.352 | 0.61907107664 | gnomAD-4.0.0 | 6.84062E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99287E-07 | 0 | 0 |
K/Q | None | None | 0.975 | N | 0.697 | 0.317 | 0.361558571881 | gnomAD-4.0.0 | 1.59047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.787 | N | 0.583 | 0.244 | 0.401042353794 | gnomAD-4.0.0 | 6.84062E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99287E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9618 | likely_pathogenic | 0.9668 | pathogenic | -0.354 | Destabilizing | 0.707 | D | 0.595 | neutral | None | None | None | None | N |
K/C | 0.9657 | likely_pathogenic | 0.9677 | pathogenic | -0.492 | Destabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/D | 0.9898 | likely_pathogenic | 0.9896 | pathogenic | 0.113 | Stabilizing | 0.945 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/E | 0.9072 | likely_pathogenic | 0.9199 | pathogenic | 0.219 | Stabilizing | 0.787 | D | 0.583 | neutral | D | 0.554338975 | None | None | N |
K/F | 0.9942 | likely_pathogenic | 0.9945 | pathogenic | -0.017 | Destabilizing | 0.894 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/G | 0.9647 | likely_pathogenic | 0.9644 | pathogenic | -0.703 | Destabilizing | 0.945 | D | 0.633 | neutral | None | None | None | None | N |
K/H | 0.7927 | likely_pathogenic | 0.8119 | pathogenic | -0.912 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/I | 0.9636 | likely_pathogenic | 0.9687 | pathogenic | 0.538 | Stabilizing | 0.013 | N | 0.445 | neutral | D | 0.637724439 | None | None | N |
K/L | 0.9391 | likely_pathogenic | 0.9456 | pathogenic | 0.538 | Stabilizing | 0.293 | N | 0.549 | neutral | None | None | None | None | N |
K/M | 0.9023 | likely_pathogenic | 0.9153 | pathogenic | 0.227 | Stabilizing | 0.97 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/N | 0.9708 | likely_pathogenic | 0.9735 | pathogenic | -0.337 | Destabilizing | 0.975 | D | 0.697 | prob.neutral | D | 0.615309917 | None | None | N |
K/P | 0.9962 | likely_pathogenic | 0.9962 | pathogenic | 0.272 | Stabilizing | 0.981 | D | 0.742 | deleterious | None | None | None | None | N |
K/Q | 0.5489 | ambiguous | 0.6082 | pathogenic | -0.364 | Destabilizing | 0.975 | D | 0.697 | prob.neutral | N | 0.503649204 | None | None | N |
K/R | 0.12 | likely_benign | 0.1315 | benign | -0.467 | Destabilizing | 0.787 | D | 0.583 | neutral | N | 0.51133554 | None | None | N |
K/S | 0.9629 | likely_pathogenic | 0.9673 | pathogenic | -0.955 | Destabilizing | 0.83 | D | 0.614 | neutral | None | None | None | None | N |
K/T | 0.8943 | likely_pathogenic | 0.9048 | pathogenic | -0.649 | Destabilizing | 0.864 | D | 0.679 | prob.neutral | N | 0.497064156 | None | None | N |
K/V | 0.9364 | likely_pathogenic | 0.9451 | pathogenic | 0.272 | Stabilizing | 0.293 | N | 0.556 | neutral | None | None | None | None | N |
K/W | 0.981 | likely_pathogenic | 0.9824 | pathogenic | 0.068 | Stabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/Y | 0.9778 | likely_pathogenic | 0.9793 | pathogenic | 0.349 | Stabilizing | 0.945 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.