Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27992 | 84199;84200;84201 | chr2:178562158;178562157;178562156 | chr2:179426885;179426884;179426883 |
N2AB | 26351 | 79276;79277;79278 | chr2:178562158;178562157;178562156 | chr2:179426885;179426884;179426883 |
N2A | 25424 | 76495;76496;76497 | chr2:178562158;178562157;178562156 | chr2:179426885;179426884;179426883 |
N2B | 18927 | 57004;57005;57006 | chr2:178562158;178562157;178562156 | chr2:179426885;179426884;179426883 |
Novex-1 | 19052 | 57379;57380;57381 | chr2:178562158;178562157;178562156 | chr2:179426885;179426884;179426883 |
Novex-2 | 19119 | 57580;57581;57582 | chr2:178562158;178562157;178562156 | chr2:179426885;179426884;179426883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.165 | N | 0.48 | 0.146 | 0.303781844768 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.537 | ambiguous | 0.5188 | ambiguous | -1.215 | Destabilizing | 0.981 | D | 0.6 | neutral | None | None | None | None | N |
A/D | 0.9049 | likely_pathogenic | 0.9215 | pathogenic | -0.932 | Destabilizing | 0.324 | N | 0.671 | neutral | N | 0.509027891 | None | None | N |
A/E | 0.8265 | likely_pathogenic | 0.8539 | pathogenic | -0.971 | Destabilizing | 0.388 | N | 0.617 | neutral | None | None | None | None | N |
A/F | 0.7962 | likely_pathogenic | 0.7918 | pathogenic | -1.16 | Destabilizing | 0.69 | D | 0.674 | neutral | None | None | None | None | N |
A/G | 0.253 | likely_benign | 0.2582 | benign | -1.178 | Destabilizing | 0.165 | N | 0.484 | neutral | N | 0.509027891 | None | None | N |
A/H | 0.9175 | likely_pathogenic | 0.9259 | pathogenic | -1.265 | Destabilizing | 0.981 | D | 0.637 | neutral | None | None | None | None | N |
A/I | 0.4425 | ambiguous | 0.4125 | ambiguous | -0.464 | Destabilizing | 0.241 | N | 0.618 | neutral | None | None | None | None | N |
A/K | 0.943 | likely_pathogenic | 0.9485 | pathogenic | -1.027 | Destabilizing | 0.388 | N | 0.617 | neutral | None | None | None | None | N |
A/L | 0.3454 | ambiguous | 0.3399 | benign | -0.464 | Destabilizing | 0.116 | N | 0.569 | neutral | None | None | None | None | N |
A/M | 0.5186 | ambiguous | 0.5132 | ambiguous | -0.526 | Destabilizing | 0.818 | D | 0.655 | neutral | None | None | None | None | N |
A/N | 0.7902 | likely_pathogenic | 0.7966 | pathogenic | -0.8 | Destabilizing | 0.818 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/P | 0.0684 | likely_benign | 0.0767 | benign | -0.584 | Destabilizing | None | N | 0.287 | neutral | N | 0.281485872 | None | None | N |
A/Q | 0.8325 | likely_pathogenic | 0.8497 | pathogenic | -0.977 | Destabilizing | 0.818 | D | 0.688 | prob.neutral | None | None | None | None | N |
A/R | 0.9129 | likely_pathogenic | 0.9241 | pathogenic | -0.736 | Destabilizing | 0.818 | D | 0.69 | prob.neutral | None | None | None | None | N |
A/S | 0.233 | likely_benign | 0.2404 | benign | -1.218 | Destabilizing | 0.165 | N | 0.48 | neutral | N | 0.508507816 | None | None | N |
A/T | 0.2608 | likely_benign | 0.2655 | benign | -1.152 | Destabilizing | 0.324 | N | 0.489 | neutral | N | 0.508507816 | None | None | N |
A/V | 0.2041 | likely_benign | 0.1928 | benign | -0.584 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.478184909 | None | None | N |
A/W | 0.9611 | likely_pathogenic | 0.9649 | pathogenic | -1.401 | Destabilizing | 0.981 | D | 0.668 | neutral | None | None | None | None | N |
A/Y | 0.8681 | likely_pathogenic | 0.8774 | pathogenic | -1.001 | Destabilizing | 0.818 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.