Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27999 | 84220;84221;84222 | chr2:178562137;178562136;178562135 | chr2:179426864;179426863;179426862 |
N2AB | 26358 | 79297;79298;79299 | chr2:178562137;178562136;178562135 | chr2:179426864;179426863;179426862 |
N2A | 25431 | 76516;76517;76518 | chr2:178562137;178562136;178562135 | chr2:179426864;179426863;179426862 |
N2B | 18934 | 57025;57026;57027 | chr2:178562137;178562136;178562135 | chr2:179426864;179426863;179426862 |
Novex-1 | 19059 | 57400;57401;57402 | chr2:178562137;178562136;178562135 | chr2:179426864;179426863;179426862 |
Novex-2 | 19126 | 57601;57602;57603 | chr2:178562137;178562136;178562135 | chr2:179426864;179426863;179426862 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.999 | N | 0.691 | 0.538 | 0.547039986869 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3313 | likely_benign | 0.2602 | benign | -0.604 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.497579526 | None | None | N |
D/C | 0.7255 | likely_pathogenic | 0.6726 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/E | 0.3393 | likely_benign | 0.2828 | benign | -0.437 | Destabilizing | 0.767 | D | 0.383 | neutral | N | 0.469307053 | None | None | N |
D/F | 0.8139 | likely_pathogenic | 0.7653 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
D/G | 0.1831 | likely_benign | 0.1496 | benign | -0.868 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | N | 0.469912483 | None | None | N |
D/H | 0.5774 | likely_pathogenic | 0.5301 | ambiguous | -0.352 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.520799115 | None | None | N |
D/I | 0.8259 | likely_pathogenic | 0.7471 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/K | 0.7292 | likely_pathogenic | 0.6796 | pathogenic | 0.023 | Stabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
D/L | 0.7127 | likely_pathogenic | 0.6326 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/M | 0.8585 | likely_pathogenic | 0.8034 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
D/N | 0.1144 | likely_benign | 0.1034 | benign | -0.4 | Destabilizing | 0.999 | D | 0.64 | neutral | N | 0.454994098 | None | None | N |
D/P | 0.9808 | likely_pathogenic | 0.9717 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
D/Q | 0.6137 | likely_pathogenic | 0.5432 | ambiguous | -0.329 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/R | 0.6961 | likely_pathogenic | 0.6588 | pathogenic | 0.215 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
D/S | 0.2454 | likely_benign | 0.2047 | benign | -0.55 | Destabilizing | 0.997 | D | 0.63 | neutral | None | None | None | None | N |
D/T | 0.6637 | likely_pathogenic | 0.5842 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/V | 0.6275 | likely_pathogenic | 0.527 | ambiguous | -0.134 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.498339994 | None | None | N |
D/W | 0.9442 | likely_pathogenic | 0.931 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
D/Y | 0.3796 | ambiguous | 0.3343 | benign | -0.057 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.5096963 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.