Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28000 | 84223;84224;84225 | chr2:178562134;178562133;178562132 | chr2:179426861;179426860;179426859 |
N2AB | 26359 | 79300;79301;79302 | chr2:178562134;178562133;178562132 | chr2:179426861;179426860;179426859 |
N2A | 25432 | 76519;76520;76521 | chr2:178562134;178562133;178562132 | chr2:179426861;179426860;179426859 |
N2B | 18935 | 57028;57029;57030 | chr2:178562134;178562133;178562132 | chr2:179426861;179426860;179426859 |
Novex-1 | 19060 | 57403;57404;57405 | chr2:178562134;178562133;178562132 | chr2:179426861;179426860;179426859 |
Novex-2 | 19127 | 57604;57605;57606 | chr2:178562134;178562133;178562132 | chr2:179426861;179426860;179426859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | rs1335831025 | -0.944 | 1.0 | D | 0.744 | 0.541 | 0.715437530537 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/C | rs1335831025 | -0.944 | 1.0 | D | 0.744 | 0.541 | 0.715437530537 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/C | rs1335831025 | -0.944 | 1.0 | D | 0.744 | 0.541 | 0.715437530537 | gnomAD-4.0.0 | 1.23993E-06 | None | None | None | None | N | None | 0 | 3.33812E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs374151070 | -0.634 | 0.999 | N | 0.712 | 0.345 | 0.30921473904 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.64E-05 | None | 0 | None | 0 | 0 | 0 |
G/D | rs374151070 | -0.634 | 0.999 | N | 0.712 | 0.345 | 0.30921473904 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
G/S | rs1335831025 | -0.459 | 0.995 | N | 0.681 | 0.495 | 0.353336612579 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.69E-05 | 0 |
G/S | rs1335831025 | -0.459 | 0.995 | N | 0.681 | 0.495 | 0.353336612579 | gnomAD-4.0.0 | 9.58319E-06 | None | None | None | None | N | None | 0 | 2.23994E-05 | None | 0 | 0 | None | 0 | 0 | 1.07961E-05 | 0 | 1.65744E-05 |
G/V | rs374151070 | -0.232 | 0.995 | D | 0.733 | 0.436 | None | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 6.52E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/V | rs374151070 | -0.232 | 0.995 | D | 0.733 | 0.436 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/V | rs374151070 | -0.232 | 0.995 | D | 0.733 | 0.436 | None | gnomAD-4.0.0 | 6.5722E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3038 | likely_benign | 0.2502 | benign | -0.353 | Destabilizing | 0.45 | N | 0.523 | neutral | N | 0.491141653 | None | None | N |
G/C | 0.3143 | likely_benign | 0.2683 | benign | -0.884 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.526389112 | None | None | N |
G/D | 0.2208 | likely_benign | 0.1925 | benign | -0.787 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | N | 0.496465947 | None | None | N |
G/E | 0.2817 | likely_benign | 0.2461 | benign | -0.965 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/F | 0.7397 | likely_pathogenic | 0.677 | pathogenic | -1.146 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
G/H | 0.3939 | ambiguous | 0.3391 | benign | -0.519 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
G/I | 0.6073 | likely_pathogenic | 0.5256 | ambiguous | -0.553 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
G/K | 0.392 | ambiguous | 0.3311 | benign | -0.788 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
G/L | 0.6788 | likely_pathogenic | 0.6048 | pathogenic | -0.553 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/M | 0.6738 | likely_pathogenic | 0.5993 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
G/N | 0.2459 | likely_benign | 0.1986 | benign | -0.448 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/P | 0.9723 | likely_pathogenic | 0.9617 | pathogenic | -0.456 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
G/Q | 0.3195 | likely_benign | 0.2709 | benign | -0.803 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
G/R | 0.2862 | likely_benign | 0.2611 | benign | -0.275 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.513600774 | None | None | N |
G/S | 0.1374 | likely_benign | 0.1212 | benign | -0.562 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | N | 0.494229072 | None | None | N |
G/T | 0.3425 | ambiguous | 0.281 | benign | -0.682 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/V | 0.5194 | ambiguous | 0.4479 | ambiguous | -0.456 | Destabilizing | 0.995 | D | 0.733 | prob.delet. | D | 0.526389112 | None | None | N |
G/W | 0.5808 | likely_pathogenic | 0.5257 | ambiguous | -1.245 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/Y | 0.5814 | likely_pathogenic | 0.5024 | ambiguous | -0.915 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.