Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28005 | 84238;84239;84240 | chr2:178562119;178562118;178562117 | chr2:179426846;179426845;179426844 |
N2AB | 26364 | 79315;79316;79317 | chr2:178562119;178562118;178562117 | chr2:179426846;179426845;179426844 |
N2A | 25437 | 76534;76535;76536 | chr2:178562119;178562118;178562117 | chr2:179426846;179426845;179426844 |
N2B | 18940 | 57043;57044;57045 | chr2:178562119;178562118;178562117 | chr2:179426846;179426845;179426844 |
Novex-1 | 19065 | 57418;57419;57420 | chr2:178562119;178562118;178562117 | chr2:179426846;179426845;179426844 |
Novex-2 | 19132 | 57619;57620;57621 | chr2:178562119;178562118;178562117 | chr2:179426846;179426845;179426844 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.684 | N | 0.415 | 0.396 | 0.564094393547 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
E/Q | rs1451115384 | 0.046 | 0.012 | N | 0.179 | 0.057 | 0.210429274316 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
E/Q | rs1451115384 | 0.046 | 0.012 | N | 0.179 | 0.057 | 0.210429274316 | gnomAD-4.0.0 | 1.59284E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86022E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1825 | likely_benign | 0.1949 | benign | -0.483 | Destabilizing | 0.472 | N | 0.407 | neutral | D | 0.533251545 | None | None | N |
E/C | 0.9115 | likely_pathogenic | 0.9191 | pathogenic | -0.185 | Destabilizing | 0.996 | D | 0.508 | neutral | None | None | None | None | N |
E/D | 0.3321 | likely_benign | 0.3168 | benign | -0.545 | Destabilizing | 0.684 | D | 0.404 | neutral | D | 0.526672289 | None | None | N |
E/F | 0.9007 | likely_pathogenic | 0.8913 | pathogenic | -0.19 | Destabilizing | 0.984 | D | 0.467 | neutral | None | None | None | None | N |
E/G | 0.2237 | likely_benign | 0.2367 | benign | -0.731 | Destabilizing | 0.684 | D | 0.415 | neutral | N | 0.494343745 | None | None | N |
E/H | 0.7438 | likely_pathogenic | 0.7547 | pathogenic | -0.062 | Destabilizing | 0.953 | D | 0.397 | neutral | None | None | None | None | N |
E/I | 0.5406 | ambiguous | 0.489 | ambiguous | 0.153 | Stabilizing | 0.953 | D | 0.461 | neutral | None | None | None | None | N |
E/K | 0.2825 | likely_benign | 0.2867 | benign | 0.105 | Stabilizing | 0.309 | N | 0.437 | neutral | N | 0.500963109 | None | None | N |
E/L | 0.5505 | ambiguous | 0.5234 | ambiguous | 0.153 | Stabilizing | 0.742 | D | 0.431 | neutral | None | None | None | None | N |
E/M | 0.5518 | ambiguous | 0.5301 | ambiguous | 0.264 | Stabilizing | 0.984 | D | 0.447 | neutral | None | None | None | None | N |
E/N | 0.4739 | ambiguous | 0.4646 | ambiguous | -0.343 | Destabilizing | 0.742 | D | 0.387 | neutral | None | None | None | None | N |
E/P | 0.451 | ambiguous | 0.4861 | ambiguous | -0.038 | Destabilizing | 0.953 | D | 0.404 | neutral | None | None | None | None | N |
E/Q | 0.1631 | likely_benign | 0.1671 | benign | -0.257 | Destabilizing | 0.012 | N | 0.179 | neutral | N | 0.470760292 | None | None | N |
E/R | 0.458 | ambiguous | 0.4714 | ambiguous | 0.36 | Stabilizing | 0.009 | N | 0.262 | neutral | None | None | None | None | N |
E/S | 0.3588 | ambiguous | 0.3749 | ambiguous | -0.494 | Destabilizing | 0.742 | D | 0.394 | neutral | None | None | None | None | N |
E/T | 0.3641 | ambiguous | 0.3617 | ambiguous | -0.287 | Destabilizing | 0.742 | D | 0.411 | neutral | None | None | None | None | N |
E/V | 0.2952 | likely_benign | 0.2757 | benign | -0.038 | Destabilizing | 0.939 | D | 0.411 | neutral | N | 0.518399523 | None | None | N |
E/W | 0.9664 | likely_pathogenic | 0.9641 | pathogenic | 0.007 | Stabilizing | 0.996 | D | 0.556 | neutral | None | None | None | None | N |
E/Y | 0.8062 | likely_pathogenic | 0.7981 | pathogenic | 0.056 | Stabilizing | 0.984 | D | 0.447 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.