Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28009 | 84250;84251;84252 | chr2:178562107;178562106;178562105 | chr2:179426834;179426833;179426832 |
N2AB | 26368 | 79327;79328;79329 | chr2:178562107;178562106;178562105 | chr2:179426834;179426833;179426832 |
N2A | 25441 | 76546;76547;76548 | chr2:178562107;178562106;178562105 | chr2:179426834;179426833;179426832 |
N2B | 18944 | 57055;57056;57057 | chr2:178562107;178562106;178562105 | chr2:179426834;179426833;179426832 |
Novex-1 | 19069 | 57430;57431;57432 | chr2:178562107;178562106;178562105 | chr2:179426834;179426833;179426832 |
Novex-2 | 19136 | 57631;57632;57633 | chr2:178562107;178562106;178562105 | chr2:179426834;179426833;179426832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1337839201 | -1.793 | 0.999 | N | 0.539 | 0.477 | 0.69600953434 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1337839201 | -1.793 | 0.999 | N | 0.539 | 0.477 | 0.69600953434 | gnomAD-4.0.0 | 1.85981E-06 | None | None | None | None | N | None | 1.33583E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09856E-05 | 1.60185E-05 |
V/D | None | -1.397 | 1.0 | N | 0.81 | 0.671 | 0.890010646008 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.64E-05 | None | 0 | None | 0 | 0 | 0 |
V/D | None | -1.397 | 1.0 | N | 0.81 | 0.671 | 0.890010646008 | gnomAD-4.0.0 | 1.36892E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52832E-05 | None | 0 | 0 | 8.99643E-07 | 0 | 0 |
V/F | rs770470074 | -1.411 | 1.0 | D | 0.786 | 0.441 | 0.85955502653 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
V/F | rs770470074 | -1.411 | 1.0 | D | 0.786 | 0.441 | 0.85955502653 | gnomAD-4.0.0 | 6.84472E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16034E-05 | 0 |
V/G | rs1337839201 | None | 1.0 | D | 0.78 | 0.66 | 0.920757238843 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/G | rs1337839201 | None | 1.0 | D | 0.78 | 0.66 | 0.920757238843 | gnomAD-4.0.0 | 6.57626E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47046E-05 | 0 | 0 |
V/I | None | None | 0.997 | N | 0.551 | 0.297 | 0.595871345579 | gnomAD-4.0.0 | 6.84472E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99628E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5508 | ambiguous | 0.5238 | ambiguous | -1.983 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.491532588 | None | None | N |
V/C | 0.7985 | likely_pathogenic | 0.7923 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
V/D | 0.909 | likely_pathogenic | 0.9243 | pathogenic | -2.121 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.517500882 | None | None | N |
V/E | 0.7731 | likely_pathogenic | 0.7992 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/F | 0.2747 | likely_benign | 0.2663 | benign | -1.431 | Destabilizing | 1.0 | D | 0.786 | deleterious | D | 0.530037882 | None | None | N |
V/G | 0.5724 | likely_pathogenic | 0.6042 | pathogenic | -2.395 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.523234874 | None | None | N |
V/H | 0.8832 | likely_pathogenic | 0.8919 | pathogenic | -1.936 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
V/I | 0.0766 | likely_benign | 0.0763 | benign | -0.903 | Destabilizing | 0.997 | D | 0.551 | neutral | N | 0.502024561 | None | None | N |
V/K | 0.7809 | likely_pathogenic | 0.7998 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/L | 0.2361 | likely_benign | 0.2483 | benign | -0.903 | Destabilizing | 0.997 | D | 0.571 | neutral | N | 0.49538659 | None | None | N |
V/M | 0.2086 | likely_benign | 0.2001 | benign | -0.921 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
V/N | 0.766 | likely_pathogenic | 0.7805 | pathogenic | -1.679 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/P | 0.9875 | likely_pathogenic | 0.989 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/Q | 0.7246 | likely_pathogenic | 0.7445 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.7283 | likely_pathogenic | 0.7608 | pathogenic | -1.247 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/S | 0.6772 | likely_pathogenic | 0.6727 | pathogenic | -2.303 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
V/T | 0.4634 | ambiguous | 0.4622 | ambiguous | -2.092 | Highly Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
V/W | 0.8953 | likely_pathogenic | 0.9008 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
V/Y | 0.7174 | likely_pathogenic | 0.719 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.