Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28019 | 84280;84281;84282 | chr2:178562077;178562076;178562075 | chr2:179426804;179426803;179426802 |
N2AB | 26378 | 79357;79358;79359 | chr2:178562077;178562076;178562075 | chr2:179426804;179426803;179426802 |
N2A | 25451 | 76576;76577;76578 | chr2:178562077;178562076;178562075 | chr2:179426804;179426803;179426802 |
N2B | 18954 | 57085;57086;57087 | chr2:178562077;178562076;178562075 | chr2:179426804;179426803;179426802 |
Novex-1 | 19079 | 57460;57461;57462 | chr2:178562077;178562076;178562075 | chr2:179426804;179426803;179426802 |
Novex-2 | 19146 | 57661;57662;57663 | chr2:178562077;178562076;178562075 | chr2:179426804;179426803;179426802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs769665204 | -0.246 | None | N | 0.259 | 0.119 | 0.525049811399 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.08 | likely_benign | 0.0847 | benign | -1.058 | Destabilizing | 0.005 | N | 0.327 | neutral | D | 0.522093189 | None | None | N |
S/C | 0.0847 | likely_benign | 0.0858 | benign | -1.091 | Destabilizing | 0.356 | N | 0.527 | neutral | None | None | None | None | N |
S/D | 0.5222 | ambiguous | 0.5723 | pathogenic | -1.337 | Destabilizing | 0.072 | N | 0.335 | neutral | None | None | None | None | N |
S/E | 0.4584 | ambiguous | 0.5001 | ambiguous | -1.222 | Destabilizing | 0.031 | N | 0.314 | neutral | None | None | None | None | N |
S/F | 0.1641 | likely_benign | 0.1812 | benign | -1.282 | Destabilizing | None | N | 0.339 | neutral | None | None | None | None | N |
S/G | 0.1254 | likely_benign | 0.1373 | benign | -1.363 | Destabilizing | 0.031 | N | 0.335 | neutral | None | None | None | None | N |
S/H | 0.2553 | likely_benign | 0.2572 | benign | -1.779 | Destabilizing | 0.628 | D | 0.531 | neutral | None | None | None | None | N |
S/I | 0.1327 | likely_benign | 0.1329 | benign | -0.315 | Destabilizing | 0.038 | N | 0.433 | neutral | None | None | None | None | N |
S/K | 0.5577 | ambiguous | 0.5905 | pathogenic | -0.552 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
S/L | 0.1031 | likely_benign | 0.1099 | benign | -0.315 | Destabilizing | None | N | 0.259 | neutral | N | 0.479073131 | None | None | N |
S/M | 0.1536 | likely_benign | 0.1582 | benign | -0.185 | Destabilizing | 0.214 | N | 0.527 | neutral | None | None | None | None | N |
S/N | 0.153 | likely_benign | 0.1572 | benign | -1.055 | Destabilizing | 0.072 | N | 0.332 | neutral | None | None | None | None | N |
S/P | 0.9141 | likely_pathogenic | 0.939 | pathogenic | -0.531 | Destabilizing | 0.106 | N | 0.523 | neutral | N | 0.499383401 | None | None | N |
S/Q | 0.3768 | ambiguous | 0.3931 | ambiguous | -1.063 | Destabilizing | 0.072 | N | 0.429 | neutral | None | None | None | None | N |
S/R | 0.4629 | ambiguous | 0.5061 | ambiguous | -0.655 | Destabilizing | 0.038 | N | 0.439 | neutral | None | None | None | None | N |
S/T | 0.0643 | likely_benign | 0.0626 | benign | -0.871 | Destabilizing | None | N | 0.083 | neutral | N | 0.468639919 | None | None | N |
S/V | 0.126 | likely_benign | 0.1268 | benign | -0.531 | Destabilizing | 0.016 | N | 0.39 | neutral | None | None | None | None | N |
S/W | 0.326 | likely_benign | 0.3657 | ambiguous | -1.346 | Destabilizing | 0.864 | D | 0.544 | neutral | None | None | None | None | N |
S/Y | 0.1553 | likely_benign | 0.1715 | benign | -0.971 | Destabilizing | 0.038 | N | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.