Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28021 | 84286;84287;84288 | chr2:178562071;178562070;178562069 | chr2:179426798;179426797;179426796 |
N2AB | 26380 | 79363;79364;79365 | chr2:178562071;178562070;178562069 | chr2:179426798;179426797;179426796 |
N2A | 25453 | 76582;76583;76584 | chr2:178562071;178562070;178562069 | chr2:179426798;179426797;179426796 |
N2B | 18956 | 57091;57092;57093 | chr2:178562071;178562070;178562069 | chr2:179426798;179426797;179426796 |
Novex-1 | 19081 | 57466;57467;57468 | chr2:178562071;178562070;178562069 | chr2:179426798;179426797;179426796 |
Novex-2 | 19148 | 57667;57668;57669 | chr2:178562071;178562070;178562069 | chr2:179426798;179426797;179426796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.196 | N | 0.453 | 0.095 | 0.209622950755 | gnomAD-4.0.0 | 1.59246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43357E-05 | 0 |
S/P | None | None | 0.065 | N | 0.493 | 0.144 | 0.0666544352282 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.083 | likely_benign | 0.0817 | benign | -0.781 | Destabilizing | None | N | 0.154 | neutral | N | 0.478531626 | None | None | N |
S/C | 0.0714 | likely_benign | 0.0772 | benign | -0.886 | Destabilizing | 0.196 | N | 0.453 | neutral | N | 0.479745134 | None | None | N |
S/D | 0.3246 | likely_benign | 0.3612 | ambiguous | -1.23 | Destabilizing | 0.044 | N | 0.383 | neutral | None | None | None | None | N |
S/E | 0.3831 | ambiguous | 0.4431 | ambiguous | -1.125 | Destabilizing | 0.018 | N | 0.373 | neutral | None | None | None | None | N |
S/F | 0.0909 | likely_benign | 0.101 | benign | -0.707 | Destabilizing | 0.033 | N | 0.514 | neutral | N | 0.434530133 | None | None | N |
S/G | 0.1218 | likely_benign | 0.1294 | benign | -1.113 | Destabilizing | 0.009 | N | 0.317 | neutral | None | None | None | None | N |
S/H | 0.1708 | likely_benign | 0.1921 | benign | -1.519 | Destabilizing | 0.497 | N | 0.451 | neutral | None | None | None | None | N |
S/I | 0.0634 | likely_benign | 0.076 | benign | 0.022 | Stabilizing | None | N | 0.303 | neutral | None | None | None | None | N |
S/K | 0.5141 | ambiguous | 0.5975 | pathogenic | -0.734 | Destabilizing | 0.018 | N | 0.366 | neutral | None | None | None | None | N |
S/L | 0.0638 | likely_benign | 0.0684 | benign | 0.022 | Stabilizing | None | N | 0.293 | neutral | None | None | None | None | N |
S/M | 0.0995 | likely_benign | 0.1086 | benign | 0.04 | Stabilizing | 0.138 | N | 0.497 | neutral | None | None | None | None | N |
S/N | 0.0834 | likely_benign | 0.0882 | benign | -1.131 | Destabilizing | 0.044 | N | 0.425 | neutral | None | None | None | None | N |
S/P | 0.8715 | likely_pathogenic | 0.8985 | pathogenic | -0.21 | Destabilizing | 0.065 | N | 0.493 | neutral | N | 0.50920125 | None | None | N |
S/Q | 0.3169 | likely_benign | 0.3482 | ambiguous | -1.112 | Destabilizing | 0.085 | N | 0.435 | neutral | None | None | None | None | N |
S/R | 0.4122 | ambiguous | 0.5079 | ambiguous | -0.815 | Destabilizing | 0.044 | N | 0.52 | neutral | None | None | None | None | N |
S/T | 0.0591 | likely_benign | 0.0569 | benign | -0.92 | Destabilizing | None | N | 0.154 | neutral | N | 0.394064803 | None | None | N |
S/V | 0.0858 | likely_benign | 0.0912 | benign | -0.21 | Destabilizing | None | N | 0.298 | neutral | None | None | None | None | N |
S/W | 0.1831 | likely_benign | 0.2204 | benign | -0.819 | Destabilizing | 0.788 | D | 0.525 | neutral | None | None | None | None | N |
S/Y | 0.1066 | likely_benign | 0.1178 | benign | -0.462 | Destabilizing | 0.065 | N | 0.566 | neutral | N | 0.456502915 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.