Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28034 | 84325;84326;84327 | chr2:178562032;178562031;178562030 | chr2:179426759;179426758;179426757 |
N2AB | 26393 | 79402;79403;79404 | chr2:178562032;178562031;178562030 | chr2:179426759;179426758;179426757 |
N2A | 25466 | 76621;76622;76623 | chr2:178562032;178562031;178562030 | chr2:179426759;179426758;179426757 |
N2B | 18969 | 57130;57131;57132 | chr2:178562032;178562031;178562030 | chr2:179426759;179426758;179426757 |
Novex-1 | 19094 | 57505;57506;57507 | chr2:178562032;178562031;178562030 | chr2:179426759;179426758;179426757 |
Novex-2 | 19161 | 57706;57707;57708 | chr2:178562032;178562031;178562030 | chr2:179426759;179426758;179426757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1243085385 | None | 0.998 | N | 0.446 | 0.343 | 0.240491677333 | gnomAD-4.0.0 | 6.84403E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99562E-07 | 0 | 0 |
E/V | None | None | 0.733 | N | 0.49 | 0.209 | 0.324161360171 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1972 | likely_benign | 0.2222 | benign | -0.873 | Destabilizing | 0.989 | D | 0.515 | neutral | N | 0.476159672 | None | None | N |
E/C | 0.7911 | likely_pathogenic | 0.8208 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/D | 0.1699 | likely_benign | 0.1819 | benign | -1.544 | Destabilizing | 0.998 | D | 0.379 | neutral | N | 0.499479248 | None | None | N |
E/F | 0.6692 | likely_pathogenic | 0.6853 | pathogenic | -1.035 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
E/G | 0.2337 | likely_benign | 0.2736 | benign | -1.22 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.502980914 | None | None | N |
E/H | 0.4051 | ambiguous | 0.4304 | ambiguous | -1.274 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
E/I | 0.3298 | likely_benign | 0.3264 | benign | 0.074 | Stabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/K | 0.203 | likely_benign | 0.2347 | benign | -0.9 | Destabilizing | 0.998 | D | 0.446 | neutral | N | 0.501498046 | None | None | N |
E/L | 0.3507 | ambiguous | 0.3779 | ambiguous | 0.074 | Stabilizing | 0.983 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/M | 0.397 | ambiguous | 0.4143 | ambiguous | 0.544 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/N | 0.3105 | likely_benign | 0.3187 | benign | -1.152 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
E/P | 0.9522 | likely_pathogenic | 0.9605 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.1378 | likely_benign | 0.1475 | benign | -0.985 | Destabilizing | 0.999 | D | 0.609 | neutral | N | 0.477333108 | None | None | N |
E/R | 0.3148 | likely_benign | 0.3723 | ambiguous | -0.908 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/S | 0.1871 | likely_benign | 0.2034 | benign | -1.639 | Destabilizing | 0.996 | D | 0.511 | neutral | None | None | None | None | N |
E/T | 0.1796 | likely_benign | 0.1866 | benign | -1.319 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/V | 0.21 | likely_benign | 0.2127 | benign | -0.221 | Destabilizing | 0.733 | D | 0.49 | neutral | N | 0.479506621 | None | None | N |
E/W | 0.8744 | likely_pathogenic | 0.897 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/Y | 0.5632 | ambiguous | 0.5778 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.