Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28049 | 84370;84371;84372 | chr2:178561987;178561986;178561985 | chr2:179426714;179426713;179426712 |
N2AB | 26408 | 79447;79448;79449 | chr2:178561987;178561986;178561985 | chr2:179426714;179426713;179426712 |
N2A | 25481 | 76666;76667;76668 | chr2:178561987;178561986;178561985 | chr2:179426714;179426713;179426712 |
N2B | 18984 | 57175;57176;57177 | chr2:178561987;178561986;178561985 | chr2:179426714;179426713;179426712 |
Novex-1 | 19109 | 57550;57551;57552 | chr2:178561987;178561986;178561985 | chr2:179426714;179426713;179426712 |
Novex-2 | 19176 | 57751;57752;57753 | chr2:178561987;178561986;178561985 | chr2:179426714;179426713;179426712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.002 | N | 0.131 | 0.07 | 0.335414705075 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
T/I | rs762467183 | 0.374 | 0.81 | N | 0.481 | 0.246 | 0.623996689363 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
T/S | None | None | 0.002 | N | 0.132 | 0.048 | 0.341226946553 | gnomAD-4.0.0 | 3.18465E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71942E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0842 | likely_benign | 0.084 | benign | -1.07 | Destabilizing | 0.002 | N | 0.131 | neutral | N | 0.495541306 | None | None | N |
T/C | 0.3414 | ambiguous | 0.3694 | ambiguous | -0.695 | Destabilizing | 0.992 | D | 0.461 | neutral | None | None | None | None | N |
T/D | 0.2906 | likely_benign | 0.2894 | benign | -0.387 | Destabilizing | 0.617 | D | 0.437 | neutral | None | None | None | None | N |
T/E | 0.2481 | likely_benign | 0.2458 | benign | -0.295 | Destabilizing | 0.617 | D | 0.466 | neutral | None | None | None | None | N |
T/F | 0.2684 | likely_benign | 0.2831 | benign | -0.922 | Destabilizing | 0.92 | D | 0.574 | neutral | None | None | None | None | N |
T/G | 0.2241 | likely_benign | 0.2213 | benign | -1.404 | Destabilizing | 0.002 | N | 0.268 | neutral | None | None | None | None | N |
T/H | 0.164 | likely_benign | 0.1676 | benign | -1.539 | Destabilizing | 0.977 | D | 0.546 | neutral | None | None | None | None | N |
T/I | 0.1855 | likely_benign | 0.1878 | benign | -0.24 | Destabilizing | 0.81 | D | 0.481 | neutral | N | 0.520746395 | None | None | N |
T/K | 0.1375 | likely_benign | 0.1371 | benign | -0.521 | Destabilizing | 0.447 | N | 0.454 | neutral | None | None | None | None | N |
T/L | 0.1256 | likely_benign | 0.1262 | benign | -0.24 | Destabilizing | 0.617 | D | 0.445 | neutral | None | None | None | None | N |
T/M | 0.1128 | likely_benign | 0.1172 | benign | -0.117 | Destabilizing | 0.972 | D | 0.465 | neutral | None | None | None | None | N |
T/N | 0.0861 | likely_benign | 0.0823 | benign | -0.749 | Destabilizing | 0.379 | N | 0.345 | neutral | N | 0.457753709 | None | None | N |
T/P | 0.3002 | likely_benign | 0.3225 | benign | -0.485 | Destabilizing | 0.896 | D | 0.471 | neutral | D | 0.531963466 | None | None | N |
T/Q | 0.1664 | likely_benign | 0.1661 | benign | -0.774 | Destabilizing | 0.85 | D | 0.49 | neutral | None | None | None | None | N |
T/R | 0.1179 | likely_benign | 0.1246 | benign | -0.476 | Destabilizing | 0.85 | D | 0.477 | neutral | None | None | None | None | N |
T/S | 0.09 | likely_benign | 0.0872 | benign | -1.107 | Destabilizing | 0.002 | N | 0.132 | neutral | N | 0.459156431 | None | None | N |
T/V | 0.1487 | likely_benign | 0.1446 | benign | -0.485 | Destabilizing | 0.447 | N | 0.348 | neutral | None | None | None | None | N |
T/W | 0.6055 | likely_pathogenic | 0.6469 | pathogenic | -0.859 | Destabilizing | 0.992 | D | 0.579 | neutral | None | None | None | None | N |
T/Y | 0.2406 | likely_benign | 0.2557 | benign | -0.58 | Destabilizing | 0.972 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.