Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28066 | 84421;84422;84423 | chr2:178561936;178561935;178561934 | chr2:179426663;179426662;179426661 |
N2AB | 26425 | 79498;79499;79500 | chr2:178561936;178561935;178561934 | chr2:179426663;179426662;179426661 |
N2A | 25498 | 76717;76718;76719 | chr2:178561936;178561935;178561934 | chr2:179426663;179426662;179426661 |
N2B | 19001 | 57226;57227;57228 | chr2:178561936;178561935;178561934 | chr2:179426663;179426662;179426661 |
Novex-1 | 19126 | 57601;57602;57603 | chr2:178561936;178561935;178561934 | chr2:179426663;179426662;179426661 |
Novex-2 | 19193 | 57802;57803;57804 | chr2:178561936;178561935;178561934 | chr2:179426663;179426662;179426661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1703825463 | None | 0.822 | N | 0.512 | 0.299 | 0.272205846399 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.18 | likely_benign | 0.1717 | benign | -0.605 | Destabilizing | 0.822 | D | 0.503 | neutral | N | 0.468419497 | None | None | N |
E/C | 0.8524 | likely_pathogenic | 0.854 | pathogenic | -0.148 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/D | 0.0923 | likely_benign | 0.0947 | benign | -0.54 | Destabilizing | 0.006 | N | 0.1 | neutral | N | 0.463569668 | None | None | N |
E/F | 0.8277 | likely_pathogenic | 0.8278 | pathogenic | -0.383 | Destabilizing | 0.993 | D | 0.663 | neutral | None | None | None | None | N |
E/G | 0.2206 | likely_benign | 0.2059 | benign | -0.849 | Destabilizing | 0.698 | D | 0.532 | neutral | N | 0.491069655 | None | None | N |
E/H | 0.4705 | ambiguous | 0.4765 | ambiguous | -0.355 | Destabilizing | 0.978 | D | 0.529 | neutral | None | None | None | None | N |
E/I | 0.5705 | likely_pathogenic | 0.5589 | ambiguous | 0.023 | Stabilizing | 0.978 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/K | 0.2114 | likely_benign | 0.1908 | benign | 0.065 | Stabilizing | 0.822 | D | 0.512 | neutral | N | 0.479739803 | None | None | N |
E/L | 0.5963 | likely_pathogenic | 0.5888 | pathogenic | 0.023 | Stabilizing | 0.978 | D | 0.67 | neutral | None | None | None | None | N |
E/M | 0.5549 | ambiguous | 0.5543 | ambiguous | 0.268 | Stabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
E/N | 0.2003 | likely_benign | 0.2055 | benign | -0.315 | Destabilizing | 0.043 | N | 0.203 | neutral | None | None | None | None | N |
E/P | 0.9591 | likely_pathogenic | 0.9532 | pathogenic | -0.166 | Destabilizing | 0.978 | D | 0.593 | neutral | None | None | None | None | N |
E/Q | 0.1975 | likely_benign | 0.1902 | benign | -0.258 | Destabilizing | 0.97 | D | 0.535 | neutral | N | 0.495210712 | None | None | N |
E/R | 0.3518 | ambiguous | 0.3309 | benign | 0.268 | Stabilizing | 0.956 | D | 0.539 | neutral | None | None | None | None | N |
E/S | 0.1802 | likely_benign | 0.1882 | benign | -0.5 | Destabilizing | 0.754 | D | 0.488 | neutral | None | None | None | None | N |
E/T | 0.2337 | likely_benign | 0.2418 | benign | -0.299 | Destabilizing | 0.86 | D | 0.533 | neutral | None | None | None | None | N |
E/V | 0.3745 | ambiguous | 0.3582 | ambiguous | -0.166 | Destabilizing | 0.97 | D | 0.629 | neutral | N | 0.502452414 | None | None | N |
E/W | 0.9321 | likely_pathogenic | 0.9311 | pathogenic | -0.183 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/Y | 0.6795 | likely_pathogenic | 0.6765 | pathogenic | -0.137 | Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.