Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28080 | 84463;84464;84465 | chr2:178561894;178561893;178561892 | chr2:179426621;179426620;179426619 |
N2AB | 26439 | 79540;79541;79542 | chr2:178561894;178561893;178561892 | chr2:179426621;179426620;179426619 |
N2A | 25512 | 76759;76760;76761 | chr2:178561894;178561893;178561892 | chr2:179426621;179426620;179426619 |
N2B | 19015 | 57268;57269;57270 | chr2:178561894;178561893;178561892 | chr2:179426621;179426620;179426619 |
Novex-1 | 19140 | 57643;57644;57645 | chr2:178561894;178561893;178561892 | chr2:179426621;179426620;179426619 |
Novex-2 | 19207 | 57844;57845;57846 | chr2:178561894;178561893;178561892 | chr2:179426621;179426620;179426619 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.002 | N | 0.165 | 0.176 | 0.229264304666 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/Q | rs1198142735 | None | 0.784 | N | 0.358 | 0.174 | 0.264081493735 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1198142735 | None | 0.784 | N | 0.358 | 0.174 | 0.264081493735 | gnomAD-4.0.0 | 2.5629E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78668E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0928 | likely_benign | 0.0876 | benign | -0.086 | Destabilizing | 0.002 | N | 0.165 | neutral | N | 0.456566338 | None | None | N |
E/C | 0.6548 | likely_pathogenic | 0.6118 | pathogenic | -0.244 | Destabilizing | 0.995 | D | 0.294 | neutral | None | None | None | None | N |
E/D | 0.109 | likely_benign | 0.0994 | benign | -0.325 | Destabilizing | 0.006 | N | 0.17 | neutral | N | 0.487158604 | None | None | N |
E/F | 0.5796 | likely_pathogenic | 0.5202 | ambiguous | -0.045 | Destabilizing | 0.944 | D | 0.355 | neutral | None | None | None | None | N |
E/G | 0.1434 | likely_benign | 0.1244 | benign | -0.222 | Destabilizing | 0.473 | N | 0.357 | neutral | N | 0.51728951 | None | None | N |
E/H | 0.3039 | likely_benign | 0.2776 | benign | 0.536 | Stabilizing | 0.981 | D | 0.342 | neutral | None | None | None | None | N |
E/I | 0.1768 | likely_benign | 0.1549 | benign | 0.221 | Stabilizing | 0.031 | N | 0.231 | neutral | None | None | None | None | N |
E/K | 0.0955 | likely_benign | 0.0894 | benign | 0.392 | Stabilizing | 0.642 | D | 0.32 | neutral | N | 0.434054838 | None | None | N |
E/L | 0.211 | likely_benign | 0.1812 | benign | 0.221 | Stabilizing | 0.329 | N | 0.326 | neutral | None | None | None | None | N |
E/M | 0.2824 | likely_benign | 0.2461 | benign | -0.014 | Destabilizing | 0.944 | D | 0.325 | neutral | None | None | None | None | N |
E/N | 0.1806 | likely_benign | 0.1568 | benign | 0.073 | Stabilizing | 0.543 | D | 0.359 | neutral | None | None | None | None | N |
E/P | 0.3955 | ambiguous | 0.3541 | ambiguous | 0.137 | Stabilizing | 0.828 | D | 0.395 | neutral | None | None | None | None | N |
E/Q | 0.1001 | likely_benign | 0.0957 | benign | 0.095 | Stabilizing | 0.784 | D | 0.358 | neutral | N | 0.475018813 | None | None | N |
E/R | 0.1585 | likely_benign | 0.1496 | benign | 0.663 | Stabilizing | 0.828 | D | 0.346 | neutral | None | None | None | None | N |
E/S | 0.1308 | likely_benign | 0.1174 | benign | -0.056 | Destabilizing | 0.329 | N | 0.306 | neutral | None | None | None | None | N |
E/T | 0.138 | likely_benign | 0.1241 | benign | 0.063 | Stabilizing | 0.013 | N | 0.151 | neutral | None | None | None | None | N |
E/V | 0.1146 | likely_benign | 0.1059 | benign | 0.137 | Stabilizing | 0.27 | N | 0.304 | neutral | N | 0.515769357 | None | None | N |
E/W | 0.7772 | likely_pathogenic | 0.738 | pathogenic | 0.036 | Stabilizing | 0.995 | D | 0.323 | neutral | None | None | None | None | N |
E/Y | 0.4416 | ambiguous | 0.392 | ambiguous | 0.185 | Stabilizing | 0.981 | D | 0.357 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.