Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28081 | 84466;84467;84468 | chr2:178561891;178561890;178561889 | chr2:179426618;179426617;179426616 |
N2AB | 26440 | 79543;79544;79545 | chr2:178561891;178561890;178561889 | chr2:179426618;179426617;179426616 |
N2A | 25513 | 76762;76763;76764 | chr2:178561891;178561890;178561889 | chr2:179426618;179426617;179426616 |
N2B | 19016 | 57271;57272;57273 | chr2:178561891;178561890;178561889 | chr2:179426618;179426617;179426616 |
Novex-1 | 19141 | 57646;57647;57648 | chr2:178561891;178561890;178561889 | chr2:179426618;179426617;179426616 |
Novex-2 | 19208 | 57847;57848;57849 | chr2:178561891;178561890;178561889 | chr2:179426618;179426617;179426616 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | None | None | 0.967 | N | 0.465 | 0.43 | 0.454798141022 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85865E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.791 | likely_pathogenic | 0.7867 | pathogenic | -0.883 | Destabilizing | 0.916 | D | 0.487 | neutral | None | None | None | None | I |
Y/C | 0.4625 | ambiguous | 0.4545 | ambiguous | 0.029 | Stabilizing | 0.999 | D | 0.645 | neutral | N | 0.498975559 | None | None | I |
Y/D | 0.3057 | likely_benign | 0.3393 | benign | 0.918 | Stabilizing | 0.025 | N | 0.493 | neutral | N | 0.400243335 | None | None | I |
Y/E | 0.7664 | likely_pathogenic | 0.7684 | pathogenic | 0.903 | Stabilizing | 0.845 | D | 0.484 | neutral | None | None | None | None | I |
Y/F | 0.1647 | likely_benign | 0.1554 | benign | -0.465 | Destabilizing | 0.981 | D | 0.519 | neutral | N | 0.500428972 | None | None | I |
Y/G | 0.6611 | likely_pathogenic | 0.6556 | pathogenic | -1.078 | Destabilizing | 0.975 | D | 0.519 | neutral | None | None | None | None | I |
Y/H | 0.491 | ambiguous | 0.4712 | ambiguous | 0.099 | Stabilizing | 0.994 | D | 0.57 | neutral | N | 0.507066943 | None | None | I |
Y/I | 0.7446 | likely_pathogenic | 0.7078 | pathogenic | -0.388 | Destabilizing | 0.987 | D | 0.574 | neutral | None | None | None | None | I |
Y/K | 0.8406 | likely_pathogenic | 0.8163 | pathogenic | 0.113 | Stabilizing | 0.975 | D | 0.601 | neutral | None | None | None | None | I |
Y/L | 0.697 | likely_pathogenic | 0.6516 | pathogenic | -0.388 | Destabilizing | 0.957 | D | 0.547 | neutral | None | None | None | None | I |
Y/M | 0.7518 | likely_pathogenic | 0.7239 | pathogenic | -0.14 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | I |
Y/N | 0.2071 | likely_benign | 0.2166 | benign | -0.059 | Destabilizing | 0.935 | D | 0.605 | neutral | N | 0.511144611 | None | None | I |
Y/P | 0.98 | likely_pathogenic | 0.9779 | pathogenic | -0.534 | Destabilizing | 0.987 | D | 0.648 | neutral | None | None | None | None | I |
Y/Q | 0.8125 | likely_pathogenic | 0.796 | pathogenic | -0.04 | Destabilizing | 0.987 | D | 0.563 | neutral | None | None | None | None | I |
Y/R | 0.7894 | likely_pathogenic | 0.7659 | pathogenic | 0.437 | Stabilizing | 0.987 | D | 0.603 | neutral | None | None | None | None | I |
Y/S | 0.458 | ambiguous | 0.4692 | ambiguous | -0.55 | Destabilizing | 0.967 | D | 0.465 | neutral | N | 0.476397319 | None | None | I |
Y/T | 0.6754 | likely_pathogenic | 0.6443 | pathogenic | -0.476 | Destabilizing | 0.975 | D | 0.559 | neutral | None | None | None | None | I |
Y/V | 0.6531 | likely_pathogenic | 0.6251 | pathogenic | -0.534 | Destabilizing | 0.987 | D | 0.509 | neutral | None | None | None | None | I |
Y/W | 0.6525 | likely_pathogenic | 0.6362 | pathogenic | -0.52 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.