Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28097 | 84514;84515;84516 | chr2:178561843;178561842;178561841 | chr2:179426570;179426569;179426568 |
N2AB | 26456 | 79591;79592;79593 | chr2:178561843;178561842;178561841 | chr2:179426570;179426569;179426568 |
N2A | 25529 | 76810;76811;76812 | chr2:178561843;178561842;178561841 | chr2:179426570;179426569;179426568 |
N2B | 19032 | 57319;57320;57321 | chr2:178561843;178561842;178561841 | chr2:179426570;179426569;179426568 |
Novex-1 | 19157 | 57694;57695;57696 | chr2:178561843;178561842;178561841 | chr2:179426570;179426569;179426568 |
Novex-2 | 19224 | 57895;57896;57897 | chr2:178561843;178561842;178561841 | chr2:179426570;179426569;179426568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.014 | N | 0.237 | 0.144 | 0.112648838833 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1296 | likely_benign | 0.1073 | benign | -0.693 | Destabilizing | 0.014 | N | 0.237 | neutral | N | 0.445714626 | None | None | N |
T/C | 0.6844 | likely_pathogenic | 0.5993 | pathogenic | -0.381 | Destabilizing | 0.994 | D | 0.651 | neutral | None | None | None | None | N |
T/D | 0.7491 | likely_pathogenic | 0.5812 | pathogenic | -0.347 | Destabilizing | 0.956 | D | 0.572 | neutral | None | None | None | None | N |
T/E | 0.6244 | likely_pathogenic | 0.4738 | ambiguous | -0.392 | Destabilizing | 0.956 | D | 0.559 | neutral | None | None | None | None | N |
T/F | 0.6911 | likely_pathogenic | 0.5168 | ambiguous | -0.964 | Destabilizing | 0.978 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/G | 0.4356 | ambiguous | 0.3356 | benign | -0.891 | Destabilizing | 0.754 | D | 0.635 | neutral | None | None | None | None | N |
T/H | 0.6246 | likely_pathogenic | 0.4815 | ambiguous | -1.207 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
T/I | 0.3716 | ambiguous | 0.2641 | benign | -0.269 | Destabilizing | 0.942 | D | 0.639 | neutral | N | 0.466533393 | None | None | N |
T/K | 0.3646 | ambiguous | 0.2536 | benign | -0.64 | Destabilizing | 0.956 | D | 0.568 | neutral | None | None | None | None | N |
T/L | 0.1941 | likely_benign | 0.1468 | benign | -0.269 | Destabilizing | 0.754 | D | 0.549 | neutral | None | None | None | None | N |
T/M | 0.1177 | likely_benign | 0.099 | benign | 0.168 | Stabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | N |
T/N | 0.2496 | likely_benign | 0.1584 | benign | -0.478 | Destabilizing | 0.942 | D | 0.6 | neutral | N | 0.483734297 | None | None | N |
T/P | 0.3806 | ambiguous | 0.3117 | benign | -0.38 | Destabilizing | 0.971 | D | 0.645 | neutral | N | 0.506995159 | None | None | N |
T/Q | 0.4457 | ambiguous | 0.3376 | benign | -0.782 | Destabilizing | 0.956 | D | 0.643 | neutral | None | None | None | None | N |
T/R | 0.3398 | likely_benign | 0.2262 | benign | -0.283 | Destabilizing | 0.956 | D | 0.643 | neutral | None | None | None | None | N |
T/S | 0.2291 | likely_benign | 0.1706 | benign | -0.724 | Destabilizing | 0.058 | N | 0.279 | neutral | N | 0.465281822 | None | None | N |
T/V | 0.2471 | likely_benign | 0.1913 | benign | -0.38 | Destabilizing | 0.754 | D | 0.566 | neutral | None | None | None | None | N |
T/W | 0.9201 | likely_pathogenic | 0.8488 | pathogenic | -0.877 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/Y | 0.6968 | likely_pathogenic | 0.53 | ambiguous | -0.643 | Destabilizing | 0.993 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.