Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28117 | 84574;84575;84576 | chr2:178561783;178561782;178561781 | chr2:179426510;179426509;179426508 |
N2AB | 26476 | 79651;79652;79653 | chr2:178561783;178561782;178561781 | chr2:179426510;179426509;179426508 |
N2A | 25549 | 76870;76871;76872 | chr2:178561783;178561782;178561781 | chr2:179426510;179426509;179426508 |
N2B | 19052 | 57379;57380;57381 | chr2:178561783;178561782;178561781 | chr2:179426510;179426509;179426508 |
Novex-1 | 19177 | 57754;57755;57756 | chr2:178561783;178561782;178561781 | chr2:179426510;179426509;179426508 |
Novex-2 | 19244 | 57955;57956;57957 | chr2:178561783;178561782;178561781 | chr2:179426510;179426509;179426508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.089 | 0.079 | 0.252681307341 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85861E-06 | 0 | 0 |
V/F | None | None | 0.427 | N | 0.554 | 0.085 | 0.377976839388 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.126 | likely_benign | 0.1278 | benign | -0.878 | Destabilizing | None | N | 0.089 | neutral | N | 0.413487565 | None | None | N |
V/C | 0.557 | ambiguous | 0.5623 | ambiguous | -0.715 | Destabilizing | 0.859 | D | 0.444 | neutral | None | None | None | None | N |
V/D | 0.4308 | ambiguous | 0.4275 | ambiguous | -0.36 | Destabilizing | 0.175 | N | 0.465 | neutral | N | 0.406484235 | None | None | N |
V/E | 0.3971 | ambiguous | 0.4201 | ambiguous | -0.435 | Destabilizing | 0.104 | N | 0.413 | neutral | None | None | None | None | N |
V/F | 0.1535 | likely_benign | 0.1663 | benign | -0.818 | Destabilizing | 0.427 | N | 0.554 | neutral | N | 0.463743027 | None | None | N |
V/G | 0.1199 | likely_benign | 0.1257 | benign | -1.087 | Destabilizing | None | N | 0.359 | neutral | N | 0.384108807 | None | None | N |
V/H | 0.5362 | ambiguous | 0.5341 | ambiguous | -0.525 | Destabilizing | 0.667 | D | 0.471 | neutral | None | None | None | None | N |
V/I | 0.0828 | likely_benign | 0.0788 | benign | -0.45 | Destabilizing | 0.001 | N | 0.129 | neutral | N | 0.424763351 | None | None | N |
V/K | 0.4657 | ambiguous | 0.4619 | ambiguous | -0.684 | Destabilizing | 0.055 | N | 0.423 | neutral | None | None | None | None | N |
V/L | 0.1414 | likely_benign | 0.1464 | benign | -0.45 | Destabilizing | 0.007 | N | 0.234 | neutral | N | 0.432766759 | None | None | N |
V/M | 0.1217 | likely_benign | 0.1262 | benign | -0.4 | Destabilizing | 0.497 | N | 0.383 | neutral | None | None | None | None | N |
V/N | 0.2065 | likely_benign | 0.1946 | benign | -0.419 | Destabilizing | 0.124 | N | 0.45 | neutral | None | None | None | None | N |
V/P | 0.2942 | likely_benign | 0.2392 | benign | -0.556 | Destabilizing | 0.364 | N | 0.489 | neutral | None | None | None | None | N |
V/Q | 0.3392 | likely_benign | 0.3416 | ambiguous | -0.641 | Destabilizing | 0.22 | N | 0.569 | neutral | None | None | None | None | N |
V/R | 0.4223 | ambiguous | 0.4136 | ambiguous | -0.135 | Destabilizing | 0.22 | N | 0.537 | neutral | None | None | None | None | N |
V/S | 0.1177 | likely_benign | 0.1246 | benign | -0.899 | Destabilizing | 0.001 | N | 0.233 | neutral | None | None | None | None | N |
V/T | 0.1122 | likely_benign | 0.1189 | benign | -0.865 | Destabilizing | None | N | 0.093 | neutral | None | None | None | None | N |
V/W | 0.7683 | likely_pathogenic | 0.7816 | pathogenic | -0.892 | Destabilizing | 0.958 | D | 0.485 | neutral | None | None | None | None | N |
V/Y | 0.5192 | ambiguous | 0.5164 | ambiguous | -0.615 | Destabilizing | 0.667 | D | 0.525 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.