Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28124 | 84595;84596;84597 | chr2:178561762;178561761;178561760 | chr2:179426489;179426488;179426487 |
N2AB | 26483 | 79672;79673;79674 | chr2:178561762;178561761;178561760 | chr2:179426489;179426488;179426487 |
N2A | 25556 | 76891;76892;76893 | chr2:178561762;178561761;178561760 | chr2:179426489;179426488;179426487 |
N2B | 19059 | 57400;57401;57402 | chr2:178561762;178561761;178561760 | chr2:179426489;179426488;179426487 |
Novex-1 | 19184 | 57775;57776;57777 | chr2:178561762;178561761;178561760 | chr2:179426489;179426488;179426487 |
Novex-2 | 19251 | 57976;57977;57978 | chr2:178561762;178561761;178561760 | chr2:179426489;179426488;179426487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1295072546 | -0.308 | 0.999 | N | 0.621 | 0.381 | 0.36453787251 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs1295072546 | -0.308 | 0.999 | N | 0.621 | 0.381 | 0.36453787251 | gnomAD-4.0.0 | 1.36864E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87357E-05 | 0 | 8.99536E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2248 | likely_benign | 0.2205 | benign | -1.115 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.488703025 | None | None | N |
E/C | 0.9011 | likely_pathogenic | 0.8897 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/D | 0.4967 | ambiguous | 0.5048 | ambiguous | -0.941 | Destabilizing | 0.999 | D | 0.476 | neutral | N | 0.493298155 | None | None | N |
E/F | 0.9065 | likely_pathogenic | 0.8893 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/G | 0.4026 | ambiguous | 0.3916 | ambiguous | -1.471 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.49966771 | None | None | N |
E/H | 0.6981 | likely_pathogenic | 0.675 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
E/I | 0.5175 | ambiguous | 0.4787 | ambiguous | -0.137 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/K | 0.2341 | likely_benign | 0.2125 | benign | -0.483 | Destabilizing | 0.999 | D | 0.621 | neutral | N | 0.483712595 | None | None | N |
E/L | 0.5835 | likely_pathogenic | 0.5638 | ambiguous | -0.137 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/M | 0.5825 | likely_pathogenic | 0.5644 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/N | 0.5618 | ambiguous | 0.5289 | ambiguous | -0.966 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/P | 0.7394 | likely_pathogenic | 0.7182 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Q | 0.1638 | likely_benign | 0.1505 | benign | -0.857 | Destabilizing | 1.0 | D | 0.622 | neutral | N | 0.468597308 | None | None | N |
E/R | 0.3823 | ambiguous | 0.3398 | benign | -0.244 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/S | 0.3381 | likely_benign | 0.3393 | benign | -1.322 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
E/T | 0.3503 | ambiguous | 0.3329 | benign | -1.015 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/V | 0.318 | likely_benign | 0.2914 | benign | -0.443 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.485273212 | None | None | N |
E/W | 0.9732 | likely_pathogenic | 0.9698 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/Y | 0.8494 | likely_pathogenic | 0.8305 | pathogenic | -0.281 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.