Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28125 | 84598;84599;84600 | chr2:178561759;178561758;178561757 | chr2:179426486;179426485;179426484 |
N2AB | 26484 | 79675;79676;79677 | chr2:178561759;178561758;178561757 | chr2:179426486;179426485;179426484 |
N2A | 25557 | 76894;76895;76896 | chr2:178561759;178561758;178561757 | chr2:179426486;179426485;179426484 |
N2B | 19060 | 57403;57404;57405 | chr2:178561759;178561758;178561757 | chr2:179426486;179426485;179426484 |
Novex-1 | 19185 | 57778;57779;57780 | chr2:178561759;178561758;178561757 | chr2:179426486;179426485;179426484 |
Novex-2 | 19252 | 57979;57980;57981 | chr2:178561759;178561758;178561757 | chr2:179426486;179426485;179426484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs763653948 | -2.163 | 1.0 | D | 0.866 | 0.864 | 0.872586506267 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/C | rs763653948 | -2.163 | 1.0 | D | 0.866 | 0.864 | 0.872586506267 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85887E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9957 | likely_pathogenic | 0.9944 | pathogenic | -3.125 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/C | 0.9507 | likely_pathogenic | 0.9403 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.682454645 | None | None | N |
Y/D | 0.9934 | likely_pathogenic | 0.9887 | pathogenic | -3.375 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.698474006 | None | None | N |
Y/E | 0.998 | likely_pathogenic | 0.9967 | pathogenic | -3.159 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/F | 0.3119 | likely_benign | 0.2733 | benign | -1.092 | Destabilizing | 0.999 | D | 0.763 | deleterious | D | 0.6353663 | None | None | N |
Y/G | 0.9827 | likely_pathogenic | 0.9815 | pathogenic | -3.553 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Y/H | 0.969 | likely_pathogenic | 0.9505 | pathogenic | -2.164 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.698474006 | None | None | N |
Y/I | 0.9714 | likely_pathogenic | 0.9561 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/K | 0.9976 | likely_pathogenic | 0.9958 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/L | 0.9559 | likely_pathogenic | 0.9477 | pathogenic | -1.7 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
Y/M | 0.9819 | likely_pathogenic | 0.9734 | pathogenic | -1.556 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/N | 0.9584 | likely_pathogenic | 0.9213 | pathogenic | -2.875 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.698272202 | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -2.191 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/Q | 0.997 | likely_pathogenic | 0.9947 | pathogenic | -2.623 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/R | 0.9951 | likely_pathogenic | 0.9925 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/S | 0.985 | likely_pathogenic | 0.9783 | pathogenic | -3.264 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.698474006 | None | None | N |
Y/T | 0.9945 | likely_pathogenic | 0.9918 | pathogenic | -2.921 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/V | 0.9555 | likely_pathogenic | 0.9408 | pathogenic | -2.191 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/W | 0.8894 | likely_pathogenic | 0.8713 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.