Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28130 | 84613;84614;84615 | chr2:178561744;178561743;178561742 | chr2:179426471;179426470;179426469 |
N2AB | 26489 | 79690;79691;79692 | chr2:178561744;178561743;178561742 | chr2:179426471;179426470;179426469 |
N2A | 25562 | 76909;76910;76911 | chr2:178561744;178561743;178561742 | chr2:179426471;179426470;179426469 |
N2B | 19065 | 57418;57419;57420 | chr2:178561744;178561743;178561742 | chr2:179426471;179426470;179426469 |
Novex-1 | 19190 | 57793;57794;57795 | chr2:178561744;178561743;178561742 | chr2:179426471;179426470;179426469 |
Novex-2 | 19257 | 57994;57995;57996 | chr2:178561744;178561743;178561742 | chr2:179426471;179426470;179426469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.003 | N | 0.607 | 0.249 | 0.474010150167 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
C/W | None | None | 0.987 | N | 0.717 | 0.309 | 0.464270400615 | gnomAD-4.0.0 | 6.84538E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9976E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2915 | likely_benign | 0.2559 | benign | -1.711 | Destabilizing | 0.002 | N | 0.191 | neutral | None | None | None | None | N |
C/D | 0.9101 | likely_pathogenic | 0.8734 | pathogenic | -1.82 | Destabilizing | 0.722 | D | 0.753 | deleterious | None | None | None | None | N |
C/E | 0.9062 | likely_pathogenic | 0.8728 | pathogenic | -1.583 | Destabilizing | 0.561 | D | 0.734 | prob.delet. | None | None | None | None | N |
C/F | 0.2073 | likely_benign | 0.2005 | benign | -1.164 | Destabilizing | 0.003 | N | 0.54 | neutral | N | 0.359634437 | None | None | N |
C/G | 0.2079 | likely_benign | 0.1797 | benign | -2.011 | Highly Destabilizing | 0.166 | N | 0.703 | prob.neutral | N | 0.451563163 | None | None | N |
C/H | 0.5411 | ambiguous | 0.4861 | ambiguous | -2.188 | Highly Destabilizing | 0.901 | D | 0.745 | deleterious | None | None | None | None | N |
C/I | 0.6339 | likely_pathogenic | 0.602 | pathogenic | -0.894 | Destabilizing | 0.39 | N | 0.707 | prob.neutral | None | None | None | None | N |
C/K | 0.8428 | likely_pathogenic | 0.7903 | pathogenic | -1.304 | Destabilizing | 0.39 | N | 0.722 | prob.delet. | None | None | None | None | N |
C/L | 0.5306 | ambiguous | 0.4891 | ambiguous | -0.894 | Destabilizing | 0.209 | N | 0.671 | neutral | None | None | None | None | N |
C/M | 0.6296 | likely_pathogenic | 0.5765 | pathogenic | -0.981 | Destabilizing | 0.901 | D | 0.725 | prob.delet. | None | None | None | None | N |
C/N | 0.7139 | likely_pathogenic | 0.6397 | pathogenic | -1.825 | Destabilizing | 0.561 | D | 0.754 | deleterious | None | None | None | None | N |
C/P | 0.9964 | likely_pathogenic | 0.994 | pathogenic | -1.149 | Destabilizing | 0.901 | D | 0.755 | deleterious | None | None | None | None | N |
C/Q | 0.6413 | likely_pathogenic | 0.5954 | pathogenic | -1.342 | Destabilizing | 0.818 | D | 0.756 | deleterious | None | None | None | None | N |
C/R | 0.4924 | ambiguous | 0.4408 | ambiguous | -1.74 | Destabilizing | 0.003 | N | 0.607 | neutral | N | 0.361229161 | None | None | N |
C/S | 0.2515 | likely_benign | 0.2119 | benign | -2.093 | Highly Destabilizing | 0.166 | N | 0.675 | neutral | N | 0.335584142 | None | None | N |
C/T | 0.5437 | ambiguous | 0.4913 | ambiguous | -1.705 | Destabilizing | 0.345 | N | 0.661 | neutral | None | None | None | None | N |
C/V | 0.5414 | ambiguous | 0.502 | ambiguous | -1.149 | Destabilizing | 0.345 | N | 0.669 | neutral | None | None | None | None | N |
C/W | 0.5875 | likely_pathogenic | 0.5522 | ambiguous | -1.627 | Destabilizing | 0.987 | D | 0.717 | prob.delet. | N | 0.495276655 | None | None | N |
C/Y | 0.3047 | likely_benign | 0.2791 | benign | -1.385 | Destabilizing | 0.013 | N | 0.529 | neutral | N | 0.398267396 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.